* using log directory ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.5/OhdsiReportGenerator.Rcheck’ * using R Under development (unstable) (2025-02-02 r87676) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 14.2.0 * running under: macOS Ventura 13.3.1 * using session charset: UTF-8 * checking for file ‘OhdsiReportGenerator/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘OhdsiReportGenerator’ version ‘1.0.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘OhdsiReportGenerator’ can be installed ... [3s/4s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-macos-x86_64/OhdsiReportGenerator-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/1s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [8s/6s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [9s/7s] ERROR Running ‘testthat.R’ [8s/7s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > test_check("OhdsiReportGenerator") Loading required package: OhdsiReportGenerator Connecting using SQLite driver [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-Helpers.R:89:1' • skip prediction report due to odd linux error (1): 'test-PredictionReport.R:5:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-Generate.R:10:3'): generatePresentationMultiple ──────────────── Error in `find_quarto()`: Quarto command-line tools path not found! Please make sure you have installed and added Quarto to your PATH or set the QUARTO_PATH environment variable. Backtrace: ▆ 1. └─OhdsiReportGenerator::generatePresentationMultiple(...) at test-Generate.R:10:3 2. └─quarto::quarto_render(...) 3. └─quarto:::find_quarto() 4. └─cli::cli_abort(quarto_not_found_msg) 5. └─rlang::abort(...) [ FAIL 1 | WARN 1 | SKIP 2 | PASS 385 ] Error: Test failures Execution halted Closing database connection * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [12s/11s] OK * checking PDF version of manual ... [6s/6s] OK * DONE Status: 1 ERROR * using check arguments '--no-clean-on-error ' * elapsed time (check, wall clock): 0:59