* installing *source* package ‘oscar’ ...
** this is package ‘oscar’ version ‘1.2.1’
** package ‘oscar’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.0’
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dbdc.f90 -o dbdc.o
dbdc.f90:11917:8:
11917 | IF (iters==1) THEN
| ^
Warning: 'iters' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10588:14:
10588 | iters, & ! Null step indicator.
| ^
note: 'iters' was declared here
dbdc.f90:11951:32:
11951 | .AND. nnk >= 1 .AND. nin < maxint) THEN
| ^
Warning: 'nnk' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10591:12:
10591 | nnk, & ! Consecutive null steps counter.
| ^
note: 'nnk' was declared here
dbdc.f90:19342:54:
19342 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:18595:54:
18595 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:17850:54:
17850 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c oscarc.c -o oscarc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c plqdf1.f -o plqdf1.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o oscar.so dbdc.o oscarc.o plqdf1.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
ld: warning: could not create compact unwind for _plrmr1_: does not use standard frame
ld: warning: could not create compact unwind for _mxvmul_: does not use standard frame
ld: warning: could not create compact unwind for _pladf1_: does not use standard frame
ld: warning: could not create compact unwind for _plmina_: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for _plqdf1_: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD___copy_functions_Set_info: does not use standard frame
ld: warning: could not create compact unwind for ___bundle1_MOD_update_b1: does not use standard frame
ld: warning: could not create compact unwind for ___bundle1_MOD_init_bundle_b1: does not use standard frame
ld: warning: could not create compact unwind for ___bundle2_MOD_update_b2: does not use standard frame
ld: warning: could not create compact unwind for ___bundle2_MOD_init_bundle_b2: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_heapsort_ind: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_subgradient_f1: does not use standard frame
ld: warning: could not create compact unwind for ___emutls_get_address: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_f2: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_f1: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_f1_sub: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_failures: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_rescaling_beta_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_scaling_matrix_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_rescaling_beta_mse: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_log_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_mse_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_mse: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_mse: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_mse: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_cox_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_cox: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_cox: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_cox: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_mx_reduced: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_mx_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_matrices_cox: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_log_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_log: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_mse_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_mse: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_cox_subp: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_cox: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_mx_reduced: does not use standard frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_mx_subp: does not use standard frame
ld: warning: could not create compact unwind for ___dbdc_MOD_subproblem_solver: does not use standard frame
ld: warning: could not create compact unwind for ___dbdc_MOD_quadratic_solver: does not use standard frame
ld: warning: could not create compact unwind for ___dbdc_MOD_guaranteeing_clarke: does not use standard frame
ld: warning: could not create compact unwind for ___dbdc_MOD_main_iteration: does not use standard frame
ld: warning: could not create compact unwind for ___dbdc_MOD_dbdc_algorithm: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_sub_MOD_trlieq2: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_sub_MOD_rwaxv2: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for _dobun.7.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_aggsr1.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_dlskip.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_agskip.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_dlsr1.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_dlbfgs.constprop.0.isra.0: does not use standard frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_lmbminfo_subp_log: does not use standard frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_lmbminfo_subp_mse: does not use standard frame
ld: warning: could not create compact unwind for ___initializat_MOD_init_lmbminfo: does not use standard frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_x_var: does not use standard frame
ld: warning: could not create compact unwind for ___initializat_MOD_allocate_xn: does not use standard frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_lmbm: does not use standard frame
ld: warning: could not create compact unwind for _oscar_logistic_f_: does not use standard frame
ld: warning: could not create compact unwind for _oscar_mse_f_: does not use standard frame
ld: warning: could not create compact unwind for _oscar_cox_f_: does not use standard frame
ld: warning: could not create compact unwind for _allocate_tramp_ctrl: does not use standard frame
ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_created: does not use standard frame
ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_deleted: does not use standard frame
make[1]: Nothing to be done for `oscar.so'.
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dbdc.f90 -o dbdc.o
dbdc.f90:11917:8:
11917 | IF (iters==1) THEN
| ^
Warning: 'iters' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10588:14:
10588 | iters, & ! Null step indicator.
| ^
note: 'iters' was declared here
dbdc.f90:11951:32:
11951 | .AND. nnk >= 1 .AND. nin < maxint) THEN
| ^
Warning: 'nnk' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10591:12:
10591 | nnk, & ! Consecutive null steps counter.
| ^
note: 'nnk' was declared here
dbdc.f90:19342:54:
19342 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:18595:54:
18595 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:17850:54:
17850 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: 's_ind' may be used uninitialized [-Wmaybe-uninitialized]
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c oscarc.c -o oscarc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c plqdf1.f -o plqdf1.o
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00LOCK-oscar/00new/oscar/libs
** generating debug symbols (dSYM)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/dbdc.o: timestamp mismatch between object file (2025-04-02 03:45:23.019961242) and debug map (2025-04-02 03:45:07.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/oscarc.o: timestamp mismatch between object file (2025-04-02 03:45:23.199701167) and debug map (2025-04-02 03:45:07.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/plqdf1.o: timestamp mismatch between object file (2025-04-02 03:45:23.930407237) and debug map (2025-04-02 03:45:08.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/dbdc.o: timestamp mismatch between object file (2025-04-02 03:45:23.019961242) and debug map (2025-04-02 03:45:07.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/oscarc.o: timestamp mismatch between object file (2025-04-02 03:45:23.199701167) and debug map (2025-04-02 03:45:07.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.5/oscar.Rcheck/00_pkg_src/oscar/src/plqdf1.o: timestamp mismatch between object file (2025-04-02 03:45:23.930407237) and debug map (2025-04-02 03:45:08.000000000)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (oscar)