* using log directory ‘/Volumes/Builds/packages/big-sur-arm64/results/4.5/epinetr.Rcheck’
* using R Under development (unstable) (2025-01-03 r87521)
* using platform: aarch64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.4
* using session charset: UTF-8
* checking for file ‘epinetr/DESCRIPTION’ ... OK
* this is package ‘epinetr’ version ‘0.96’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘epinetr’ can be installed ... [8s/9s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-macos-arm64/epinetr-00install.html' for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [2s/3s] OK
* checking Rd files ... [0s/0s] NOTE
checkRd: (-1) runSim.Rd:111: Lost braces
111 | \ifelse{html}{\out{r1 = 1}}{{\eqn{r_1 = 1}}{r_1 = 1}} while the individual with the lowest phenotypic value
| ^
checkRd: (-1) runSim.Rd:112: Lost braces
112 | is given the rank \ifelse{html}{\out{rn = n}}{{\eqn{r_n = n}}{r_n = n}}), the probability of an individual
| ^
checkRd: (-1) runSim.Rd:120-122: Lost braces
120 | }{
| ^
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [2s/3s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [4s/4s] OK
Running ‘testthat.R’ [4s/4s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [73s/78s] OK
* checking PDF version of manual ... [4s/5s] OK
* DONE
Status: 1 NOTE
* using check arguments '--no-clean-on-error '
* elapsed time (check, wall clock): 1:56