• using R Under development (unstable) (2024-12-05 r87423)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘vpc/DESCRIPTION’ ... OK
• this is package ‘vpc’ version ‘1.2.2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘vpc’ can be installed ... [14s/16s] OK See the install log for details.
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [19s/24s] OK
• checking Rd files ... NOTE checkRd: (-1) new_vpc_theme.Rd:21: Lost braces; missing escapes or markup?     21 | \item{obs_color}: {color for observations points}        | ^ checkRd: (-1) new_vpc_theme.Rd:22: Lost braces; missing escapes or markup?     22 | \item{obs_size}: {size for observation points}        | ^ checkRd: (-1) new_vpc_theme.Rd:23: Lost braces; missing escapes or markup?     23 | \item{obs_median_color}: {color for median observation line}        | ^ checkRd: (-1) new_vpc_theme.Rd:24: Lost braces; missing escapes or markup?     24 | \item{obs_median_linetype}: {linetype for median observation line}        | ^ checkRd: (-1) new_vpc_theme.Rd:25: Lost braces; missing escapes or markup?     25 | \item{obs_median_size}: {size for median observation line}        | ^ checkRd: (-1) new_vpc_theme.Rd:26: Lost braces; missing escapes or markup?     26 | \item{obs_ci_fill}: {color for observation CI fill}        | ^ checkRd: (-1) new_vpc_theme.Rd:27: Lost braces; missing escapes or markup?     27 | \item{obs_ci_color}: {color for observation CI lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:28: Lost braces; missing escapes or markup?     28 | \item{obs_ci_linetype}: {linetype for observation CI lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:29: Lost braces; missing escapes or markup?     29 | \item{obs_ci_size}: {size for observations CI lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:30: Lost braces; missing escapes or markup?     30 | \item{sim_pi_fill}: {fill color for simulated prediction interval areas}        | ^ checkRd: (-1) new_vpc_theme.Rd:31: Lost braces; missing escapes or markup?     31 | \item{sim_pi_alpha}: {transparency for simulated prediction interval areas}        | ^ checkRd: (-1) new_vpc_theme.Rd:32: Lost braces; missing escapes or markup?     32 | \item{sim_pi_color}: {color for simulated prediction interval lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:33: Lost braces; missing escapes or markup?     33 | \item{sim_pi_linetype}: {linetype for simulated prediction interval lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:34: Lost braces; missing escapes or markup?     34 | \item{sim_pi_size}: {size for simulated prediction interval lines}        | ^ checkRd: (-1) new_vpc_theme.Rd:35: Lost braces; missing escapes or markup?     35 | \item{sim_median_fill}: {fill color for simulated median area}        | ^ checkRd: (-1) new_vpc_theme.Rd:36: Lost braces; missing escapes or markup?     36 | \item{sim_median_alpha}: {transparency for simulated median area}        | ^ checkRd: (-1) new_vpc_theme.Rd:37: Lost braces; missing escapes or markup?     37 | \item{sim_median_color}: {color for simulated median line}        | ^ checkRd: (-1) new_vpc_theme.Rd:38: Lost braces; missing escapes or markup?     38 | \item{sim_median_linetype}: {linetype for simulated median line}        | ^ checkRd: (-1) new_vpc_theme.Rd:39: Lost braces; missing escapes or markup?     39 | \item{sim_median_size}: {size for simulated median line}        | ^ checkRd: (-1) new_vpc_theme.Rd:40: Lost braces; missing escapes or markup?     40 | \item{bin_separators_color}: {color for bin separator lines, NA for don't plot}        | ^ checkRd: (-1) new_vpc_theme.Rd:41: Lost braces; missing escapes or markup?     41 | \item{bin_separators_location}: {where to plot bin separators ("t" for top, "b" for bottom)}        | ^ checkRd: (-1) new_vpc_theme.Rd:42: Lost braces; missing escapes or markup?     42 | \item{loq_color}: {color of line showing limit of quantification}        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [37s/47s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [70s/84s] OK   Running ‘test-add_sim_index_number.R’ [18s/22s]   Running ‘test-filter_dv.R’   Running ‘test-labeller.R’   Running ‘test-scales.R’   Running ‘test-softwaretype.R’   Running ‘test-strat-col-detection.R’   Running ‘test-vpc.R’   Running ‘test-vpc_cat.R’   Running ‘test-vpc_cens.R’ [8s/10s]   Running ‘test-vpc_tte.R’ [13s/15s]
• checking PDF version of manual ... [7s/11s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 NOTE