* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/tvmediation.Rcheck’
* using R Under development (unstable) (2025-02-15 r87723)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘tvmediation/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tvmediation’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tvmediation’ can be installed ... [10s/13s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/tvmediation-00install.html' for details.
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/20s] OK
* checking Rd files ... NOTE
checkRd: (-1) estBootCIs.Rd:27: Lost braces
    27 | {boot.se}{bootstrapped standard error for the estimated mediation effect}
       |          ^
checkRd: (-1) estBootCIs.Rd:29: Lost braces; missing escapes or markup?
    29 | {CI.upper}{percentile bootstrapped CI upper limit for the estimated mediation effect}
       | ^
checkRd: (-1) estBootCIs.Rd:29: Lost braces
    29 | {CI.upper}{percentile bootstrapped CI upper limit for the estimated mediation effect}
       |           ^
checkRd: (-1) estBootCIs.Rd:31: Lost braces; missing escapes or markup?
    31 | {CI.lower}{percentile bootstrapped CI lower limit for the estimated mediation effect}
       | ^
checkRd: (-1) estBootCIs.Rd:31: Lost braces
    31 | {CI.lower}{percentile bootstrapped CI lower limit for the estimated mediation effect}
       |           ^
checkRd: (-1) tvma.Rd:89: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma.Rd:90: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma.Rd:91: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma.Rd:92: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma.Rd:93: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma.Rd:94: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:116: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:117: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:118: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:119: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:120: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:121: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:122: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:123: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:124: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:125: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvma_3trt.Rd:126: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:84: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:85: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:86: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:87: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:88: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:89: Lost braces in \enumerate; meant \describe ?
checkRd: (-1) tvmb.Rd:90: Lost braces in \enumerate; meant \describe ?
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [26s/35s] OK
* checking PDF version of manual ... [7s/10s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE