* using log directory ‘/data/localhost/ripley/R/packages/tests-devel/spmodel.Rcheck’ * using R Under development (unstable) (2026-10-03 r90638) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-10-05 01:52:48 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘spmodel/DESCRIPTION’ ... OK * this is package ‘spmodel’ version ‘0.14.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘spmodel’ can be installed ... [24s/27s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/spmodel-00install.html' for details. * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [57s/63s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [0m/30m] ERROR Running examples in ‘spmodel-Ex.R’ failed The error most likely occurred in: > ### Name: augment.spmodel > ### Title: Augment data with information from fitted model objects > ### Aliases: augment.spmodel augment.splm augment.spautor augment.spglm > ### augment.spgautor > > ### ** Examples > > spmod <- splm(z ~ water + tarp, + data = caribou, + spcov_type = "exponential", xcoord = x, ycoord = y + ) > augment(spmod) # A tibble: 30 × 10 z water tarp x y .fitted .resid .hat .cooksd .std.resid 1 2.42 Y clear 1 6 1.97 0.454 0.116 0.209 2.52 2 2.44 Y shade 2 6 2.25 0.190 0.137 0.0465 1.08 3 1.81 Y none 3 6 2.05 -0.237 0.137 0.0756 -1.38 4 1.97 N clear 4 6 2.05 -0.0842 0.174 0.00213 -0.201 5 2.38 N shade 5 6 2.34 0.0402 0.153 0.0158 0.591 6 2.22 Y none 1 5 2.05 0.177 0.148 0.0431 0.998 7 2.10 N clear 2 5 2.05 0.0508 0.156 0.00922 0.447 8 1.80 Y clear 3 5 1.97 -0.163 0.122 0.0134 -0.623 9 1.96 Y shade 4 5 2.25 -0.290 0.119 0.0642 -1.38 10 2.10 Y none 5 5 2.05 0.0521 0.131 0.0265 0.837 # ℹ 20 more rows > spmod_sulf <- splm(sulfate ~ 1, data = sulfate, spcov_type = "exponential") * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [223s/255s] OK Running ‘testthat.R’ [223s/254s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [91m/74m] ERROR Error(s) in re-building vignettes: --- re-building ‘introduction.Rmd’ using rmarkdown * checking PDF version of manual ... [7s/11s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs