* installing *source* package ‘segregation’ ...
** package ‘segregation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/segregation/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c compression.cpp -o compression.o
compression.cpp: In function 'Rcpp::List compress_compute_cpp(std::string, Rcpp::StringMatrix, int, Rcpp::NumericMatrix, std::vector<std::__cxx11::basic_string<char> >, int)':
compression.cpp:168:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  168 |         for (int row = 0; row < unit_names.size(); row++)
      |                           ~~~~^~~~~~~~~~~~~~~~~~~
compression.cpp:170:41: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  170 |             for (int col = row + 1; col < unit_names.size(); col++)
      |                                     ~~~~^~~~~~~~~~~~~~~~~~~
compression.cpp:180:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  180 |         for (int i = 0; i < ls.size(); i++)
      |                         ~~^~~~~~~~~~~
compression.cpp:279:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  279 |         for (int i = 0; i < delete_neighbors.size(); i++)
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~
compression.cpp: In function 'int find_in_sets(std::string, std::vector<std::set<std::__cxx11::basic_string<char> > >)':
compression.cpp:322:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::set<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  322 |     for (int i = 0; i < haystack.size(); i++)
      |                     ~~^~~~~~~~~~~~~~~~~
compression.cpp: In function 'Rcpp::List get_crosswalk_cpp(std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >)':
compression.cpp:336:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  336 |     for (int i = 0; i < old_unit.size(); i++)
      |                     ~~^~~~~~~~~~~~~~~~~
compression.cpp:366:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::set<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  366 |     for (int i = 0; i < bags.size(); i++)
      |                     ~~^~~~~~~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o segregation.so RcppExports.o compression.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/segregation/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/segregation/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/segregation/src'
installing to /data/gannet/ripley/R/packages/tests-devel/segregation.Rcheck/00LOCK-segregation/00new/segregation/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (segregation)