* installing *source* package ‘rshift’ ...
** this is package ‘rshift’ version ‘3.1.1’
** package ‘rshift’ successfully unpacked and MD5 sums checked
** using staged installation
cargo 1.84.1 (66221abde 2024-11-19)
rustc 1.84.1 (e71f9a9a9 2025-01-27) (Fedora 1.84.1-1.fc40)
** libs
using C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rshift/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include   -pthread -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entrypoint.c -o entrypoint.o
/usr/bin/gtar --extract --xz -f ./rust/vendor.tar.xz -C . && \
mkdir -p /data/gannet/ripley/R/packages/tests-devel/rshift/src/.cargo && \
cp ./rust/cargo_vendor_config.toml /data/gannet/ripley/R/packages/tests-devel/rshift/src/.cargo/config.toml; \
# To comply with CRAN policy the versions of cargo and rustc
# need to be inlcuded in the installation log
echo `cargo --version` && echo `rustc --version`
cargo 1.84.1 (66221abde 2024-11-19)
rustc 1.84.1 (e71f9a9a9 2025-01-27) (Fedora 1.84.1-1.fc40)
PATH="/data/gannet/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" cargo build -j 2 --release --offline --manifest-path=rust/Cargo.toml
warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter
     Locking 9 packages to latest compatible versions
   Compiling proc-macro2 v1.0.86
   Compiling unicode-ident v1.0.12
   Compiling libR-sys v0.7.1
   Compiling quote v1.0.36
   Compiling paste v1.0.15
   Compiling syn v2.0.68
   Compiling extendr-api v0.7.1
   Compiling once_cell v1.19.0
   Compiling extendr-macros v0.7.1
   Compiling rshift v3.1.1 (/data/gannet/ripley/R/packages/tests-devel/rshift/src/rust)
    Finished `release` profile [optimized] target(s) in 1m 15s
rm -Rf rust/target/release/build || true
rm -Rf /data/gannet/ripley/R/packages/tests-devel/rshift/src/.cargo || true
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o rshift.so entrypoint.o -Lrust/target/release -lrshift -lresolv -pthread
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rshift/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rshift/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rshift/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rshift.Rcheck/00LOCK-rshift/00new/rshift/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rshift)