Install log for 'rpact'

* installing *source* package ‘rpact’ ...
** this is package ‘rpact’ version ‘4.1.0’
** package ‘rpact’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rpact/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_as251.cpp -o f_as251.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c f_as251_fortran.f -o f_as251_fortran.o
f_as251_fortran.f:565:72:

  565 |       ZEXP(Z) = EXP(Z)
      |                                                                        1
Warning: Obsolescent feature: Statement function at (1)
f_as251_fortran.f:793:5:

  793 |    30 IF (DLG .LE. EPS1) GO TO 50
      |     1
Warning: Label 30 at (1) defined but not used [-Wunused-label]
f_as251_fortran.f:192:72:

  192 |          ESTT(LVL) = ESTR
      |                                                                        ^
Warning: ‘estr’ may be used uninitialized [-Wmaybe-uninitialized]
f_as251_fortran.f:24:50:

   24 |      *  FUNCN, WT, CONTRB, DLG, DX, DA, ESTL, ESTR, SUM, EXCESS, ERROR,
      |                                                  ^
note: ‘estr’ was declared here
f_as251_fortran.f:161:72:

  161 |          DLG = ABS(CONTRB - SUM)
      |                                                                        ^
Warning: ‘contrb’ may be used uninitialized [-Wmaybe-uninitialized]
f_as251_fortran.f:24:25:

   24 |      *  FUNCN, WT, CONTRB, DLG, DX, DA, ESTL, ESTR, SUM, EXCESS, ERROR,
      |                         ^
note: ‘contrb’ was declared here
f_as251_fortran.f:247:72:

  247 |       BOUND = PART3
      |                                                                        ^
Warning: ‘part3’ may be used uninitialized [-Wmaybe-uninitialized]
f_as251_fortran.f:23:50:

   23 |      *  ERFAC, EL, EL1, BOUND, PART0, PART2, PART3, FUNC0, FUNC2,
      |                                                  ^
note: ‘part3’ was declared here
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_assertions.cpp -o f_assertions.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_count_data_estimation.cpp -o f_count_data_estimation.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_design_fisher_combination_test.cpp -o f_design_fisher_combination_test.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_design_group_sequential.cpp -o f_design_group_sequential.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_simulation_base_means.cpp -o f_simulation_base_means.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_simulation_base_rates.cpp -o f_simulation_base_rates.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_simulation_base_survival.cpp -o f_simulation_base_survival.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_simulation_survival_utilities.cpp -o f_simulation_survival_utilities.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c f_utilities.cpp -o f_utilities.o
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o rpact.so RcppExports.o f_as251.o f_as251_fortran.o f_assertions.o f_count_data_estimation.o f_design_fisher_combination_test.o f_design_group_sequential.o f_simulation_base_means.o f_simulation_base_rates.o f_simulation_base_survival.o f_simulation_survival_utilities.o f_utilities.o -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rpact/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rpact/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rpact/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rpact.Rcheck/00LOCK-rpact/00new/rpact/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rpact)