- using R Under development (unstable) (2025-03-01 r87853)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
- running under: Fedora Linux 40 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘rix/DESCRIPTION’ ... OK
- this is package ‘rix’ version ‘0.15.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘rix’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/14s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking R/sysdata.rda ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rix)
Nix doesn't seem to be installed on this system.
You can still generate Nix expressions, but you won't be able to build them.
>
> test_check("rix")
### Bootstrapping isolated, project-specific, and runtime-pure R setup via Nix ###
==> Existing isolated nix-R project folder:
/tmp/Rtmp07RPMC/working_dir/RtmprKtnIwqoaxg
* current R session running outside Nix environment and not from RStudio
==> Added `.Rprofile` file and code lines for new R sessions launched from:
/tmp/Rtmp07RPMC/working_dir/RtmprKtnIwqoaxg
* Added the location of the Nix store to `PATH` environmental variable for new R sessions on host/docker RStudio:
/nix/var/nix/profiles/default/bin
==> Also adjusting `PATH` via `Sys.setenv()`, so that system commands can invoke key Nix commands like `nix-build` in this RStudio session outside Nix
* current R session running outside Nix environment and not from RStudio
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 27 ]
══ Skipped tests (49) ══════════════════════════════════════════════════════════
• On CRAN (42): 'test-fetchers.R:2:3', 'test-fetchers.R:16:3',
'test-fetchers.R:29:3', 'test-fetchers.R:43:3', 'test-fetchers.R:57:3',
'test-fetchers.R:65:3', 'test-fetchers.R:73:3', 'test-fetchers.R:97:3',
'test-fetchers.R:141:3', 'test-fetchers.R:159:3', 'test-fetchers.R:169:3',
'test-fetchers.R:191:3', 'test-fetchers.R:207:3', 'test-fetchers.R:221:3',
'test-fetchers.R:234:3', 'test-fetchers.R:243:3', 'test-fetchers.R:255:3',
'test-fetchers.R:267:3', 'test-fetchers.R:283:3', 'test-fetchers.R:300:3',
'test-fetchers.R:308:3', 'test-ga_cachix.R:6:3',
'test-get_sri_hash_deps.R:2:3', 'test-make_launcher.R:11:3',
'test-renv_helpers.R:188:5', 'test-rix.R:50:3', 'test-rix.R:112:3',
'test-rix.R:186:3', 'test-rix.R:318:3', 'test-rix.R:377:3',
'test-rix.R:443:3', 'test-rix.R:502:3', 'test-rix.R:642:3',
'test-rix.R:687:3', 'test-rix.R:732:3', 'test-rix.R:761:3',
'test-rix.R:789:3', 'test-rix_init.R:20:3', 'test-rix_init.R:45:3',
'test-rix_init.R:80:3', 'test-rix_init.R:115:3', 'test-tar_nix_ga.R:4:3'
• nix_shell_available() is not TRUE (6): 'test-nix_build.R:7:3',
'test-setup_cachix.R:2:3', 'test-setup_cachix.R:16:3', 'test-with_nix.R:9:3',
'test-with_nix.R:59:3', 'test-with_nix.R:102:3'
• os_type != "Darwin" || os_type == "Windows" is TRUE (1): 'test-rix.R:214:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-available_r.R:2:3'): available_r lists all available r versions ──
available_r() (`actual`) not equal to c(...) (`expected`).
`actual[30:33]`: "4.4.0" "4.4.1" "4.4.2" "4.4.3"
`expected[30:32]`: "4.4.0" "4.4.1" "4.4.2"
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 27 ]
Deleting unused snapshots:
• make_launcher/start-positron.sh
• make_launcher/start-rstudio.sh
• renv_helpers/default_datathin.nix
• renv_helpers/default_v0-14-0.nix
• renv_helpers/default_v0-15-5.nix
• renv_helpers/default_v0-17-3.nix
• renv_helpers/default_v1-0-7.nix
• rix/code_default.nix
• rix/codium_default.nix
• rix/dups-entries_default.nix
• rix/positron_default.nix
• rix/skip-dups-entries_default.nix
• rix/yes_quarto_default.nix
• rix_init/append_Rprofile.txt
• setup_cachix/nix.conf
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [60s/81s] OK
- checking PDF version of manual ... OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR