* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/replicateBE.Rcheck’
* using R Under development (unstable) (2025-02-15 r87726)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘replicateBE/DESCRIPTION’ ... OK
* this is package ‘replicateBE’ version ‘1.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘replicateBE’ can be installed ... [25s/65s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/replicateBE-00install.html' for details.
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [6s/15s] OK
* checking whether the package can be loaded with stated dependencies ... [5s/13s] OK
* checking whether the package can be unloaded cleanly ... [5s/12s] OK
* checking whether the namespace can be loaded with stated dependencies ... [5s/15s] OK
* checking whether the namespace can be unloaded cleanly ... [6s/17s] OK
* checking loading without being on the library search path ... [6s/18s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [36s/103s] OK
* checking Rd files ... NOTE
checkRd: (-1) method.A.Rd:200-205: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.A.Rd:206-211: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.A.Rd:231-236: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.A.Rd:237-242: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.B.Rd:201-206: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.B.Rd:207-212: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.B.Rd:232-237: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) method.B.Rd:238-243: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [7s/21s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [32s/84s] ERROR
  Running ‘testthat.R’ [31s/83s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(replicateBE)
  > test_check("replicateBE")
  [ FAIL 4 | WARN 8 | SKIP 4 | PASS 86 ]
  
  ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
  • On CRAN (4): 'testthat.R:35:3', 'testthat.R:137:3', 'testthat.R:197:3',
    'testthat.R:318:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('testthat.R:536:3'): method.B (Satterthwaite DF, CVwR, EL, 90% CI, PE) of rds29 ──
  x[, c(10, 12, 17:21)] not equivalent to c(24.86467, 20.1358, 80, 125, 88.43243, 121.5886, 103.6937).
  Component 1: Mean relative difference: 0.0538885308135
  Component 5: Mean relative difference: 0.00885581372
  Component 6: Mean relative difference: 0.010611995987
  Component 7: Mean relative difference: 0.000831132301946
  ── Failure ('testthat.R:542:3'): method.B (Satterthwaite DF, CVwR, EL, 90% CI, PE) of rds30 ──
  x[, c(10, 12, 17:21)] not equivalent to c(17.86417, 25.2277, 80, 125, 79.57553, 108.0676, 92.73371).
  Component 1: Mean relative difference: 0.0497327016967
  Component 5: Mean relative difference: 0.00794769327702
  Component 6: Mean relative difference: 0.00801084394782
  ── Failure ('testthat.R:551:3'): method.B (Kenward-Roger DF, CVwR, EL, 90% CI, PE) of rds29 ──
  x[, c(10, 12, 17:21)] not equivalent to c(25.15961, 20.1358, 80, 125, 88.42778, 121.595, 103.6937).
  Component 1: Mean relative difference: 0.0027252470762
  Component 5: Mean relative difference: 0.00858112232388
  Component 6: Mean relative difference: 0.0103320385289
  Component 7: Mean relative difference: 0.000831132301946
  ── Failure ('testthat.R:557:3'): method.B (Kenward-Roger DF, CVwR, EL, 90% CI, PE) of rds30 ──
  x[, c(10, 12, 17:21)] not equivalent to c(18.00203, 25.2277, 80, 125, 79.58062, 108.0607, 92.73371).
  Component 1: Mean relative difference: 5.01098051271e-05
  Component 5: Mean relative difference: 0.00755326102498
  Component 6: Mean relative difference: 0.00761033821495
  
  [ FAIL 4 | WARN 8 | SKIP 4 | PASS 86 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [89s/246s] OK
* checking PDF version of manual ... [13s/33s] OK
* checking HTML version of manual ... [6s/15s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 1 NOTE