* installing *source* package ‘rbm25’ ...
** this is package ‘rbm25’ version ‘0.0.3’
** package ‘rbm25’ successfully unpacked and MD5 sums checked
** using staged installation
Using cargo 1.84.1 (66221abde 2024-11-19)
Using rustc 1.84.1 (e71f9a9a9 2025-01-27) (Fedora 1.84.1-1.fc40)
** libs
using C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rbm25/src'
rm -Rf rbm25.so ./rust/target/release/librbm25.a entrypoint.o /data/gannet/ripley/R/packages/tests-devel/rbm25/src/.cargo /data/gannet/ripley/R/packages/tests-devel/rbm25/src/vendor
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c entrypoint.c -o entrypoint.o
if [ -f ./rust/vendor.tar.xz ]; then \
	tar xf rust/vendor.tar.xz && \
	mkdir -p /data/gannet/ripley/R/packages/tests-devel/rbm25/src/.cargo && \
	cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-devel/rbm25/src/.cargo/config.toml; \
fi
# In some environments, ~/.cargo/bin might not be included in PATH, so we need
# to set it here to ensure cargo can be invoked. It is appended to PATH and
# therefore is only used if cargo is absent from the user's PATH.
if [ "" != "true" ]; then \
	export CARGO_HOME=/data/gannet/ripley/R/packages/tests-devel/rbm25/src/.cargo; \
fi && \
	export PATH="/data/gannet/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \
		cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target && \
		echo `cargo --version` && echo `rustc --version`;
warning: a `-j` argument was passed to Cargo but Cargo is also configured with an external jobserver in its environment, ignoring the `-j` parameter
   Compiling proc-macro2 v1.0.92
   Compiling unicode-ident v1.0.14
   Compiling serde_json v1.0.135
   Compiling serde v1.0.217
   Compiling fnv v1.0.7
   Compiling quote v1.0.38
   Compiling syn v2.0.96
   Compiling strsim v0.11.1
   Compiling ident_case v1.0.1
   Compiling version_check v0.9.5
   Compiling ahash v0.8.11
   Compiling darling_core v0.20.10
   Compiling ryu v1.0.18
   Compiling itoa v1.0.14
   Compiling memchr v2.7.4
   Compiling once_cell v1.20.2
   Compiling thiserror v1.0.69
   Compiling zerocopy v0.7.35
   Compiling cfg-if v1.0.0
   Compiling libR-sys v0.7.1
   Compiling darling_macro v0.20.10
   Compiling stop-words v0.8.1
   Compiling thiserror-impl v1.0.69
   Compiling darling v0.20.10
   Compiling allocator-api2 v0.2.21
   Compiling paste v1.0.15
   Compiling hashbrown v0.14.5
   Compiling cached_proc_macro v0.23.0
   Compiling serde_derive v1.0.217
   Compiling extendr-api v0.7.1
   Compiling web-time v1.1.0
   Compiling cached_proc_macro_types v0.1.1
   Compiling byteorder v1.5.0
   Compiling fxhash v0.2.1
   Compiling cached v0.53.1
   Compiling extendr-macros v0.7.1
   Compiling whichlang v0.1.0
   Compiling rust-stemmers v1.2.0
   Compiling bm25 v0.3.1
   Compiling rbm25 v0.1.0 (/data/gannet/ripley/R/packages/tests-devel/rbm25/src/rust)
    Finished `release` profile [optimized] target(s) in 1m 27s
cargo 1.84.1 (66221abde 2024-11-19)
rustc 1.84.1 (e71f9a9a9 2025-01-27) (Fedora 1.84.1-1.fc40)
rm -Rf /data/gannet/ripley/R/packages/tests-devel/rbm25/src/.cargo /data/gannet/ripley/R/packages/tests-devel/rbm25/src/vendor ./rust/target/release/build; \

gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o rbm25.so entrypoint.o -L./rust/target/release -lrbm25
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rbm25/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rbm25/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rbm25/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rbm25.Rcheck/00LOCK-rbm25/00new/rbm25/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rbm25)