Install log for 'rayvertex'

* installing *source* package ‘rayvertex’ ...
** this is package ‘rayvertex’ version ‘0.12.0’
** package ‘rayvertex’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rayvertex/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c assert.cpp -o assert.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c calcnormals.cpp -o calcnormals.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c calctangents.cpp -o calctangents.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c displacement.cpp -o displacement.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c filltri.cpp -o filltri.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c light.cpp -o light.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c line.cpp -o line.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c load_obj.cpp -o load_obj.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c load_ply.cpp -o load_ply.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c loopsubdiv.cpp -o loopsubdiv.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c miniply.cpp -o miniply.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rasterize_lines_rcpp.cpp -o rasterize_lines_rcpp.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rayimage.cpp -o rayimage.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c rayraster.cpp -o rayraster.o
rayraster.cpp: In function ‘Rcpp::List rasterize(Rcpp::List, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, int, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, double, Rcpp::IntegerVector, bool, bool, bool, double, double, int, int, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, Rcpp::LogicalVector, int, bool, double, double, double, Rcpp::NumericVector, Rcpp::IntegerVector, Rcpp::NumericVector, double, double, Rcpp::NumericVector, Rcpp::LogicalVector, bool, Rcpp::LogicalVector&, Rcpp::LogicalVector&, Rcpp::LogicalVector, Rcpp::String, double, Rcpp::LogicalVector, bool, bool, Rcpp::NumericVector, bool)’:
rayraster.cpp:1252:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<IShader*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1252 |     for(int i = 0; i < depthshaders[j].size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~~~~~
rayraster.cpp:1267:29: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 1267 |   for(unsigned int i = 0; i < linear_depth.nrow(); i++) {
      |                           ~~^~~~~~~~~~~~~~~~~~~~~
rayraster.cpp:1268:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
 1268 |     for(unsigned int j= 0; j < linear_depth.ncol(); j++) {
      |                            ~~^~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c shaders.cpp -o shaders.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c smooth_normals_mesh_rcpp.cpp -o smooth_normals_mesh_rcpp.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c tonemap.cpp -o tonemap.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/spacefillr/include' -I'/data/gannet/ripley/R/test-dev/RcppThread/include' -I'/data/gannet/ripley/R/test-dev/rayimage/include' -I/usr/local/include   -I../src/glm -I../src/glm/gtc -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c wireframe.cpp -o wireframe.o
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o rayvertex.so RcppExports.o assert.o calcnormals.o calctangents.o displacement.o filltri.o light.o line.o load_obj.o load_ply.o loopsubdiv.o miniply.o rasterize_lines_rcpp.o rayimage.o rayraster.o shaders.o smooth_normals_mesh_rcpp.o tonemap.o wireframe.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rayvertex/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/rayvertex/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/rayvertex/src'
installing to /data/gannet/ripley/R/packages/tests-devel/rayvertex.Rcheck/00LOCK-rayvertex/00new/rayvertex/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rayvertex)