* installing *source* package ‘pliman’ ...
** package ‘pliman’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pliman/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c code.cpp -o code.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c code_polygons.cpp -o code_polygons.o
code.cpp: In function 'Rcpp::IntegerMatrix helper_guo_hall(Rcpp::IntegerMatrix)':
code.cpp:751:8: warning: variable 'set' set but not used [-Wunused-but-set-variable]
  751 |   auto set = [&](int col, int row) { data2(row, col) = 255; };
      |        ^~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o pliman.so RcppExports.o code.o code_polygons.o -fopenmp -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pliman/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/pliman/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/pliman/src'
installing to /data/gannet/ripley/R/packages/tests-devel/pliman.Rcheck/00LOCK-pliman/00new/pliman/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
Package {EBImage} is required. Please install it following the directions at 'https://bioconductor.org/packages/EBImage'
To use viewer = 'mapview', first install the required packages:mapview, mapedit, leaflet, leafem
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Package {EBImage} is required. Please install it following the directions at 'https://bioconductor.org/packages/EBImage'
To use viewer = 'mapview', first install the required packages:mapview, mapedit, leaflet, leafem
** testing if installed package keeps a record of temporary installation path
* DONE (pliman)