* installing *source* package ‘outliertree’ ...
** package ‘outliertree’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether g++-14 -std=gnu++17 accepts -g... yes
checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/outliertree/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c Rwrapper.cpp -o Rwrapper.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cat_outlier.cpp -o cat_outlier.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c clusters.cpp -o clusters.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c fit_model.cpp -o fit_model.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c misc.cpp -o misc.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c predict.cpp -o predict.o
predict.cpp: In function '_Z17find_new_outliersPdPiS0_miR12ModelOutputs._omp_fn.0':
predict.cpp:132:68: warning: 'num_val_this' may be used uninitialized [-Wmaybe-uninitialized]
132 | outliers_thread[omp_get_thread_num()] = follow_tree(model_outputs, prediction_data, 0, 0, row, col, col_is_num, num_val_this, cat_val_this)?
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
predict.cpp:76:12: note: 'num_val_this' was declared here
76 | double num_val_this;
| ^~~~~~~~~~~~
predict.cpp:132:68: warning: 'cat_val_this' may be used uninitialized [-Wmaybe-uninitialized]
132 | outliers_thread[omp_get_thread_num()] = follow_tree(model_outputs, prediction_data, 0, 0, row, col, col_is_num, num_val_this, cat_val_this)?
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
predict.cpp:77:9: note: 'cat_val_this' was declared here
77 | int cat_val_this;
| ^~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -DSUPPORTS_RESTRICT=1 -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/Rcereal/include' -I/usr/local/include -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c split.cpp -o split.o
split.cpp: In function 'void split_categx_categy_subset(size_t*, size_t, size_t, int*, int*, size_t, size_t, long double, size_t*, size_t*, size_t*, bool, size_t, long double*, signed char*, bool*, bool*)':
split.cpp:1158:40: warning: 'last_bit' may be used uninitialized [-Wmaybe-uninitialized]
1158 | for (size_t catx = 0; catx < last_bit; catx++) {
| ~~~~~^~~~~~~~~~
split.cpp:1112:12: note: 'last_bit' was declared here
1112 | size_t last_bit;
| ^~~~~~~~
In file included from split.cpp:34:
outlier_tree.h:69:45: warning: 'best_subset' may be used uninitialized [-Wmaybe-uninitialized]
69 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) /* https://stackoverflow.com/questions/2249731/how-do-i-get-bit-by-bit-data-from-an-integer-value-in-c */
| ~~~~~~~~~~^~~~~~~~~
split.cpp:1197:34: note: in expansion of macro 'extract_bit'
1197 | split_subset[catx] = extract_bit(best_subset, catx);
| ^~~~~~~~~~~
split.cpp:1050:12: note: 'best_subset' was declared here
1050 | size_t best_subset;
| ^~~~~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o outliertree.so RcppExports.o Rwrapper.o cat_outlier.o clusters.o fit_model.o misc.o predict.o split.o -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/outliertree/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/outliertree/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/outliertree/src'
installing to /data/gannet/ripley/R/packages/tests-devel/outliertree.Rcheck/00LOCK-outliertree/00new/outliertree/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (outliertree)