* installing *source* package ‘npsf’ ...
** package ‘npsf’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/npsf/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c radial.cpp -o radial.o
radial.cpp: In function 'void radial(double*, double*, int*, int*, int*, double*, double*, int*, int*, int*, int*, int*, double*, int*, double*)':
radial.cpp:113:49: warning: '*vertexIndices' may be used uninitialized [-Wmaybe-uninitialized]
  113 |                 _yref = (double *) malloc((*m * *_nref) * sizeof(double));
      |                                                 ^~~~~~
radial.cpp:145:13: warning: 'nrow' may be used uninitialized [-Wmaybe-uninitialized]
  145 |         int ne = nrow * ncol;
      |             ^~
radial.cpp:136:13: note: 'nrow' was declared here
  136 |         int nrow;
      |             ^~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c nonradial.cpp -o nonradial.o
nonradial.cpp: In function 'void nonradial(double*, double*, int*, int*, int*, double*, double*, int*, int*, int*, int*, int*, double*, double*, double*, int*, int*)':
nonradial.cpp:113:36: warning: '*vertexIndices' may be used uninitialized [-Wmaybe-uninitialized]
  113 |    _yref = (double *) malloc((*m * *_nref) * sizeof(double));
      |                                    ^~~~~~
nonradial.cpp:157:10: warning: 'nrow' may be used uninitialized [-Wmaybe-uninitialized]
  157 |     nrow += ncol1;
      |     ~~~~~^~~~~~~~
nonradial.cpp:136:7: note: 'nrow' was declared here
  136 |   int nrow, ncol1, yxRTSlength;
      |       ^~~~
nonradial.cpp:157:10: warning: 'ncol1' may be used uninitialized [-Wmaybe-uninitialized]
  157 |     nrow += ncol1;
      |     ~~~~~^~~~~~~~
nonradial.cpp:136:13: note: 'ncol1' was declared here
  136 |   int nrow, ncol1, yxRTSlength;
      |             ^~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c nllpk/routines.cpp -o nllpk/routines.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c nllpk/simplexMethod.cpp -o nllpk/simplexMethod.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c init.c -o init.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c fourcomp.c -o fourcomp.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"nllpk" -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c halton.c -o halton.o
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o npsf.so radial.o nonradial.o nllpk/routines.o nllpk/simplexMethod.o init.o fourcomp.o halton.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/npsf/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/npsf/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/npsf/src'
installing to /data/gannet/ripley/R/packages/tests-devel/npsf.Rcheck/00LOCK-npsf/00new/npsf/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (npsf)