* installing *source* package ‘mrfDepth’ ...
** package ‘mrfDepth’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.0’
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mrfDepth/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c AdjOutlyingness.cpp -o AdjOutlyingness.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c Auxiliary.f -o Auxiliary.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c Bagplot.f -o Bagplot.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c HalfSpaceDepth2D.f -o HalfSpaceDepth2D.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c HalfSpaceDepthContour2D.f -o HalfSpaceDepthContour2D.o
f951: Warning: Nonconforming tab character in column 1 of line 330 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 331 [-Wtabs]
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c HalfSpaceDepthDeepestLoc.f -o HalfSpaceDepthDeepestLoc.o
gfortran-14 -fpic -O1 -g -c -o HalfSpaceDepthMedian.o HalfSpaceDepthMedian.f
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c HalfSpaceDepthND.f -o HalfSpaceDepthND.o
HalfSpaceDepthND.f:307:11:
307 | I=N*INT(RAN(1),4)+1.
| 1
Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion]
HalfSpaceDepthND.f:312:11:
312 | L=N*INT(RAN(1),4)+1.
| 1
Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion]
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c HalfspaceDepth3D.f -o HalfspaceDepth3D.o
HalfspaceDepth3D.f:209:72:
209 | X(I)=X(I)-U
| ^
Warning: 'u' may be used uninitialized [-Wmaybe-uninitialized]
HalfspaceDepth3D.f:150:24:
150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS
| ^
note: 'u' was declared here
HalfspaceDepth3D.f:211:72:
211 | Z(I)=Z(I)-W
| ^
Warning: 'w' may be used uninitialized [-Wmaybe-uninitialized]
HalfspaceDepth3D.f:150:28:
150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS
| ^
note: 'w' was declared here
HalfspaceDepth3D.f:210:72:
210 | Y(I)=Y(I)-V
| ^
Warning: 'v' may be used uninitialized [-Wmaybe-uninitialized]
HalfspaceDepth3D.f:150:26:
150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS
| ^
note: 'v' was declared here
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c LinAlg.f -o LinAlg.o
LinAlg.f:110:41:
110 | subroutine eigen(nm,n,a,w,z,fv1,fv2,ierr)
| 1
Warning: Unused dummy argument 'fv2' at (1) [-Wunused-dummy-argument]
LinAlg.f:320:72:
320 | p = -s * s2 * c3 * el1 * e(l) / dl1
| ^
Warning: 'c3' may be used uninitialized [-Wmaybe-uninitialized]
LinAlg.f:189:30:
189 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag
| ^
note: 'c3' was declared here
LinAlg.f:320:72:
320 | p = -s * s2 * c3 * el1 * e(l) / dl1
| ^
Warning: 's2' may be used uninitialized [-Wmaybe-uninitialized]
LinAlg.f:189:53:
189 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag
| ^
note: 's2' was declared here
LinAlg.f:607:9:
607 | IF((LDEL-LCLPL)/=0) THEN
| ^
Warning: 'ldel' may be used uninitialized [-Wmaybe-uninitialized]
LinAlg.f:581:56:
581 | DOUBLE PRECISION HVEC(MAXPP1),TURN,SWAP,DETER,LDEL
| ^
note: 'ldel' was declared here
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c Outlyingness.cpp -o Outlyingness.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c Random.f -o Random.o
Random.f:434:5:
434 | 9000 CONTINUE
| 1
Warning: Label 9000 at (1) defined but not used [-Wunused-label]
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c RegresDepth3D.f -o RegresDepth3D.o
RegresDepth3D.f:160:4:
160 | 200 END
| 1
Warning: Label 200 at (1) defined but not used [-Wunused-label]
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c RegresDepth4D.f -o RegresDepth4D.o
RegresDepth4D.f:169:4:
169 | 200 END
| 1
Warning: Label 200 at (1) defined but not used [-Wunused-label]
RegresDepth4D.f:281:53:
281 | SUBROUTINE RDEPTH41B(T,N,X1,X2,X3,XN1,XN2,XN3,Y,ALPHA,RESID,JRES,
| 1
Warning: Unused dummy argument 'y' at (1) [-Wunused-dummy-argument]
RegresDepth4D.f:215:43:
215 | SUBROUTINE STANDRDEPTH41(N,X,XN,EPS,J)
| 1
Warning: Unused dummy argument 'j' at (1) [-Wunused-dummy-argument]
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c RegresDepthDeepest.f -o RegresDepthDeepest.o
gfortran-14 -fpic -g -O2 -mtune=native -Wall -pedantic -c RegresDepthNd.f -o RegresDepthNd.o
f951: Warning: Nonconforming tab character in column 1 of line 36 [-Wtabs]
f951: Warning: Nonconforming tab character in column 1 of line 113 [-Wtabs]
RegresDepthNd.f:172:4:
172 | 300 END
| 1
Warning: Label 300 at (1) defined but not used [-Wunused-label]
RegresDepthNd.f:372:11:
372 | I=N*RAN(1)+1.D0
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
RegresDepthNd.f:377:11:
377 | L=N*RAN(1)+1.
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
RegresDepthNd.f:578:46:
578 | DOUBLE PRECISION X(MAXN,MAXP1),R(NNP1),S
| 1
Warning: Unused variable 's' declared at (1) [-Wunused-variable]
RegresDepthNd.f:349:41:
349 | SUBROUTINE DEP_RDEPTH_APPR(N,NP,NP1,NDIR,MAXN,MAXP1,
| 1
Warning: Unused dummy argument 'np1' at (1) [-Wunused-dummy-argument]
RegresDepthNd.f:448:20:
448 | ELSEIF (ABS(K-D).LE.EPS) THEN
| ^
Warning: 'd' may be used uninitialized [-Wmaybe-uninitialized]
RegresDepthNd.f:359:36:
359 | DOUBLE PRECISION EPS,R(NP),K,D,RAN(1)
| ^
note: 'd' was declared here
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c auxyl.cpp -o auxyl.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c dirOutl.cpp -o dirOutl.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c dirOutl_aux.cpp -o dirOutl_aux.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c hdepthND.cpp -o hdepthND.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c mc.cpp -o mc.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c medcouple.cpp -o medcouple.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c mrfDepth_init.c -o mrfDepth_init.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -DEIGEN_DONT_PARALLELIZE -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c randy.cpp -o randy.o
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o mrfDepth.so AdjOutlyingness.o Auxiliary.o Bagplot.o HalfSpaceDepth2D.o HalfSpaceDepthContour2D.o HalfSpaceDepthDeepestLoc.o HalfSpaceDepthMedian.o HalfSpaceDepthND.o HalfspaceDepth3D.o LinAlg.o Outlyingness.o Random.o RegresDepth3D.o RegresDepth4D.o RegresDepthDeepest.o RegresDepthNd.o auxyl.o dirOutl.o dirOutl_aux.o hdepthND.o mc.o medcouple.o mrfDepth_init.o randy.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mrfDepth/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/mrfDepth/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/mrfDepth/src'
installing to /data/gannet/ripley/R/packages/tests-devel/mrfDepth.Rcheck/00LOCK-mrfDepth/00new/mrfDepth/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mrfDepth)