- using R Under development (unstable) (2024-06-28 r86849)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (GCC) 14.1.0
GNU Fortran (GCC) 14.1.0
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘mlr3spatiotempcv/DESCRIPTION’ ... OK
- this is package ‘mlr3spatiotempcv’ version ‘2.3.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘mlr3spatiotempcv’ can be installed ... [27s/66s] OK
See the install log for details.
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [45s/101s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [38s/79s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [182s/101s] ERROR
Running ‘testthat.R’ [182s/100s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("checkmate")
+ library("testthat")
+ library("mlr3spatiotempcv")
+ test_check("mlr3spatiotempcv")
+ }
Loading required package: mlr3
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 1211 ]
══ Skipped tests (23) ══════════════════════════════════════════════════════════
• On CRAN (20): 'test-1-autoplot.R:40:3', 'test-1-autoplot.R:72:3',
'test-1-autoplot.R:98:3', 'test-1-autoplot.R:130:3',
'test-1-autoplot.R:157:3', 'test-1-autoplot.R:189:3',
'test-1-autoplot.R:224:3', 'test-1-autoplot.R:257:3',
'test-1-autoplot.R:268:3', 'test-1-autoplot.R:315:3',
'test-1-autoplot.R:343:3', 'test-1-autoplot.R:377:3',
'test-2-autoplot.R:129:3', 'test-2-autoplot.R:182:3',
'test-2-autoplot.R:204:3', 'test-2-autoplot.R:246:3',
'test-2-autoplot.R:300:3', 'test-2-autoplot.R:352:3',
'test-autoplot_buffer.R:19:3', 'test-mlr3pipelines-graph-integration.R:5:3'
• On Linux (2): 'test-2-autoplot.R:8:3', 'test-2-autoplot.R:54:3'
• empty test (1): 'test-helper-DataBackend.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-autotuner.R:22:3'): AutoTuner works with sptcv methods ─────────
Error in `.__TunerRandomSearch__initialize(self = self, private = private,
super = super)`: object 'OptimizerRandomSearch' not found
Backtrace:
▆
1. └─mlr3tuning::tnr("random_search") at test-autotuner.R:22:3
2. └─mlr3misc::dictionary_sugar_get(mlr_tuners, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. ├─base::do.call(constructor$new, cargs)
6. └─R6 (local) `<fn>`()
7. └─mlr3tuning (local) initialize(...)
8. └─mlr3tuning:::.__TunerRandomSearch__initialize(...)
9. └─super$initialize(optimizer = OptimizerRandomSearch$new(), man = "mlr3tuning::mlr_tuners_random_search")
10. └─mlr3tuning:::.__TunerFromOptimizer__initialize(...)
11. └─bbotk::assert_optimizer(optimizer)
12. └─checkmate::assert_r6(optimizer, "Optimizer")
13. └─checkmate::checkR6(...)
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 1211 ]
Deleting unused snapshots:
• 1-autoplot/autoplot-show-blocks-true-show-labels-true.svg
• 1-autoplot/custom-cv-fold-1-2-sample-fold-n.svg
• 1-autoplot/custom-cv-fold-1-2.svg
• 1-autoplot/custom-cv-fold-1-sample-fold-n.svg
• 1-autoplot/custom-cv-fold-1.svg
• 1-autoplot/custom-cv-sample-fold-n.svg
• 1-autoplot/cv-fold-1-2-groups-col-role.svg
• 1-autoplot/cv-fold-1-2-sample-fold-n.svg
• 1-autoplot/cv-fold-1-2.svg
• 1-autoplot/cv-fold-1-groups-col-role.svg
• 1-autoplot/cv-fold-1-sample-fold-n.svg
• 1-autoplot/cv-fold-1.svg
• 1-autoplot/cv-sample-fold-n.svg
• 1-autoplot/repcv-fold-1-2-rep-1.svg
• 1-autoplot/repcv-fold-1-2-rep-2.svg
• 1-autoplot/repcv-fold-1-rep-1.svg
• 1-autoplot/repcv-fold-1-rep-2.svg
• 1-autoplot/repspcvblock-fold-1-2-rep-1.svg
• 1-autoplot/repspcvblock-fold-1-2-rep-2.svg
• 1-autoplot/repspcvblock-fold-1-rep-1.svg
• 1-autoplot/repspcvblock-fold-1-rep-2.svg
• 1-autoplot/repspcvcoords-fold-1-2-rep-1.svg
• 1-autoplot/repspcvcoords-fold-1-2-rep-2.svg
• 1-autoplot/repspcvcoords-fold-1-2-sample-fold-n.svg
• 1-autoplot/repspcvcoords-fold-1-rep-1.svg
• 1-autoplot/repspcvcoords-fold-1-rep-2.svg
• 1-autoplot/repspcvcoords-fold-1-sample-fold-n.svg
• 1-autoplot/repspcvcoords-sample-fold-n.svg
• 1-autoplot/repspcvenv-fold-1-2-rep-1.svg
• 1-autoplot/repspcvenv-fold-1-2-rep-2.svg
• 1-autoplot/repspcvenv-fold-1-rep-1.svg
• 1-autoplot/repspcvenv-fold-1-rep-2.svg
• 1-autoplot/spcvblock-fold-1-2-sample-fold-n.svg
• 1-autoplot/spcvblock-fold-1-2.svg
• 1-autoplot/spcvblock-fold-1-sample-fold-n.svg
• 1-autoplot/spcvblock-fold-1.svg
• 1-autoplot/spcvblock-sample-fold-n.svg
• 1-autoplot/spcvcoords-fold-1-2.svg
• 1-autoplot/spcvcoords-fold-1.svg
• 1-autoplot/spcvenv-fold-1-2-sample-fold-n.svg
• 1-autoplot/spcvenv-fold-1-2.svg
• 1-autoplot/spcvenv-fold-1-sample-fold-n.svg
• 1-autoplot/spcvenv-fold-1.svg
• 1-autoplot/spcvenv-sample-fold-n.svg
• 2-autoplot/repspcvdisc-fold-1-2-rep-2.svg
• 2-autoplot/repspcvdisc-fold-1-2-sample-fold-n.svg
• 2-autoplot/repspcvdisc-fold-1-rep-1-sample-n-fold.svg
• 2-autoplot/repspcvdisc-fold-1-rep-2.svg
• 2-autoplot/repspcvdisc-fold-1-sample-fold-n.svg
• 2-autoplot/repspcvdisc-sample-fold-n.svg
• 2-autoplot/repspcvknndm-fold-1-2-rep-2.svg
• 2-autoplot/repspcvknndm-fold-1-2-sample-fold-n.svg
• 2-autoplot/repspcvknndm-fold-1-rep-1-sample-n-fold.svg
• 2-autoplot/repspcvknndm-fold-1-rep-2.svg
• 2-autoplot/repspcvknndm-fold-1-sample-fold-n.svg
• 2-autoplot/repspcvknndm-sample-fold-n.svg
• 2-autoplot/repspcvtiles-fold-1-2-rep-2.svg
• 2-autoplot/repspcvtiles-fold-1-2-sample-fold-n.svg
• 2-autoplot/repspcvtiles-fold-1-2.svg
• 2-autoplot/repspcvtiles-fold-1-rep-2.svg
• 2-autoplot/repspcvtiles-fold-1-sample-fold-n.svg
• 2-autoplot/repspcvtiles-fold-1.svg
• 2-autoplot/repspcvtiles-sample-fold-n.svg
• 2-autoplot/repspcvtiles-show-omitted.svg
• 2-autoplot/repsptcvcstf-2d-space-var-fold-1-2-rep-2.svg
• 2-autoplot/repsptcvcstf-2d-space-var-fold-1-rep-2.svg
• 2-autoplot/repsptcvcstf-fold-1-2-rep-1.svg
• 2-autoplot/repsptcvcstf-fold-1-2-rep-2.svg
• 2-autoplot/repsptcvcstf-fold-1-rep-1-sample-fold-n.svg
• 2-autoplot/repsptcvcstf-fold-1-rep-2.svg
• 2-autoplot/spcvdisc-fold-1-2.svg
• 2-autoplot/spcvdisc-fold-1.svg
• 2-autoplot/spcvdisc-show-omitted.svg
• 2-autoplot/spcvknndm-fold-1-2.svg
• 2-autoplot/spcvknndm-fold-1.svg
• 2-autoplot/sptcvcstf-2d-space-var-all-test-sets.svg
• 2-autoplot/sptcvcstf-2d-space-var-fold-1-2.svg
• 2-autoplot/sptcvcstf-2d-space-var-fold-1.svg
• 2-autoplot/sptcvcstf-2d-time-var-all-test-sets.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-rep-2.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1-2-sample-fold-n.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1-2.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1-rep-2.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1-sample-fold-n.svg
• 2-autoplot/sptcvcstf-2d-time-var-fold-1.svg
• 2-autoplot/sptcvcstf-2d-time-var-sample-fold-n.svg
• 2-autoplot/sptcvcstf-3d-time-var-fold-1-2-sample-fold-n.svg
• 2-autoplot/sptcvcstf-3d-time-var-fold-1-2.svg
• 2-autoplot/sptcvcstf-3d-time-var-fold-1-sample-fold-n.svg
• autoplot_buffer/spcvbuffer-fold-1-2.svg
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [57s/135s] OK
- checking PDF version of manual ... [12s/24s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR