* installing *source* package ‘lolog’ ...
** package ‘lolog’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lolog/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from ../inst/include/lolog.h:6,
from RcppExports.cpp:4:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RcppModule.cpp -o RcppModule.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c StatController.cpp -o StatController.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c main.cpp -o main.o
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from RcppModule.cpp:4:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
In file included from ../inst/include/LatentOrderLikelihood.h:4,
from RcppModule.cpp:6:
../inst/include/Model.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Model<Engine>::names() [with Engine = lolog::Undirected]':
RcppModule.cpp:85:41: required from here
85 | .method("names",&Model<Undirected>::names)
| ^~~~~
../inst/include/Model.h:280:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
280 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:285:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
285 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:287:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
287 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::offset() [with Engine = lolog::Undirected]':
RcppModule.cpp:86:42: required from here
86 | .method("offset",&Model<Undirected>::offset)
| ^~~~~~
../inst/include/Model.h:300:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
300 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:305:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
305 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:307:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
307 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setThetas(std::vector<double>) [with Engine = lolog::Undirected]':
RcppModule.cpp:88:45: required from here
88 | .method("setThetas",&Model<Undirected>::setThetas)
| ^~~~~~~~~
../inst/include/Model.h:202:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
202 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:205:28: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
205 | if(newThetas.size()!= n){
| ~~~~~~~~~~~~~~~~^~~~
../inst/include/Model.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:212:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
212 | for(int j=0;j<vals->size();j++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setVertexOrderVector(std::vector<int>) [with Engine = lolog::Undirected]':
RcppModule.cpp:89:50: required from here
89 | .method("setVertexOrder",&Model<Undirected>::setVertexOrderVector)
| ^~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:492:55: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | if(vertexOrder.size() != 0 && net->size() != vertexOrder.size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<bool> lolog::Model<Engine>::isIndependent(bool, bool) [with Engine = lolog::Undirected]':
RcppModule.cpp:91:49: required from here
91 | .method("isIndependent",&Model<Undirected>::isIndependent)
| ^~~~~~~~~~~~~
../inst/include/Model.h:515:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
515 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:520:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
520 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:527:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
527 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:535:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
535 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:540:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
540 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Model<Engine>::names() [with Engine = lolog::Directed]':
RcppModule.cpp:102:39: required from here
102 | .method("names",&Model<Directed>::names)
| ^~~~~
../inst/include/Model.h:280:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
280 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:285:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
285 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:287:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
287 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::offset() [with Engine = lolog::Directed]':
RcppModule.cpp:103:40: required from here
103 | .method("offset",&Model<Directed>::offset)
| ^~~~~~
../inst/include/Model.h:300:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
300 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:305:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
305 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:307:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
307 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setThetas(std::vector<double>) [with Engine = lolog::Directed]':
RcppModule.cpp:105:43: required from here
105 | .method("setThetas",&Model<Directed>::setThetas)
| ^~~~~~~~~
../inst/include/Model.h:202:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
202 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:205:28: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
205 | if(newThetas.size()!= n){
| ~~~~~~~~~~~~~~~~^~~~
../inst/include/Model.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:212:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
212 | for(int j=0;j<vals->size();j++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setVertexOrderVector(std::vector<int>) [with Engine = lolog::Directed]':
RcppModule.cpp:106:48: required from here
106 | .method("setVertexOrder",&Model<Directed>::setVertexOrderVector)
| ^~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:492:55: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | if(vertexOrder.size() != 0 && net->size() != vertexOrder.size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<bool> lolog::Model<Engine>::isIndependent(bool, bool) [with Engine = lolog::Directed]':
RcppModule.cpp:108:47: required from here
108 | .method("isIndependent",&Model<Directed>::isIndependent)
| ^~~~~~~~~~~~~
../inst/include/Model.h:515:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
515 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:520:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
520 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:527:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
527 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:535:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
535 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:540:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
540 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Undirected]':
../inst/include/Model.h:397:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
397 | calculateStatistics();
| ^~~~~~~~~~~~~~~~~~~
RcppModule.cpp:83:45: required from here
83 | .method("calculate",&Model<Undirected>::calculate)
| ^~~~~~~~~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Undirected]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
RcppModule.cpp:83:45: required from here
83 | .method("calculate",&Model<Undirected>::calculate)
| ^~~~~~~~~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Undirected]':
../inst/include/Model.h:258:44: required from 'Rcpp::NumericVector lolog::Model<Engine>::statisticsR() [with Engine = lolog::Undirected; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
258 | NumericVector res = wrap(statistics());
| ~~~~~~~~~~^~
RcppModule.cpp:84:46: required from here
84 | .method("statistics",&Model<Undirected>::statisticsR)
| ^~~~~~~~~~~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::thetas() [with Engine = lolog::Undirected]':
../inst/include/Model.h:270:34: required from 'Rcpp::NumericVector lolog::Model<Engine>::thetasR() [with Engine = lolog::Undirected; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
270 | NumericVector res = wrap(thetas());
| ^~~~~~
RcppModule.cpp:87:42: required from here
87 | .method("thetas",&Model<Undirected>::thetasR)
| ^~~~~~~
../inst/include/Model.h:181:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
181 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:186:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
186 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:188:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
188 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Directed]':
../inst/include/Model.h:397:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Directed]'
397 | calculateStatistics();
| ^~~~~~~~~~~~~~~~~~~
RcppModule.cpp:100:43: required from here
100 | .method("calculate",&Model<Directed>::calculate)
| ^~~~~~~~~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Directed]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Directed]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
RcppModule.cpp:100:43: required from here
100 | .method("calculate",&Model<Directed>::calculate)
| ^~~~~~~~~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Directed]':
../inst/include/Model.h:258:44: required from 'Rcpp::NumericVector lolog::Model<Engine>::statisticsR() [with Engine = lolog::Directed; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
258 | NumericVector res = wrap(statistics());
| ~~~~~~~~~~^~
RcppModule.cpp:101:44: required from here
101 | .method("statistics",&Model<Directed>::statisticsR)
| ^~~~~~~~~~~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::thetas() [with Engine = lolog::Directed]':
../inst/include/Model.h:270:34: required from 'Rcpp::NumericVector lolog::Model<Engine>::thetasR() [with Engine = lolog::Directed; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
270 | NumericVector res = wrap(thetas());
| ^~~~~~
RcppModule.cpp:104:40: required from here
104 | .method("thetas",&Model<Directed>::thetasR)
| ^~~~~~~
../inst/include/Model.h:181:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
181 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:186:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
186 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:188:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
188 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'void lolog::LatentOrderLikelihood<Engine>::generateOrder(std::vector<int>&, VectorPtr) [with Engine = lolog::Undirected; VectorPtr = boost::shared_ptr<std::vector<int> >]':
../inst/include/LatentOrderLikelihood.h:157:23: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
157 | this->generateOrder(vertices, model->getVertexOrder());
| ~~~~~~^~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:72:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
72 | for(int i=0;i<y.size();i++)
| ~^~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]':
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<predictors.size();i++){
| ~^~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:242:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
242 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:266:39: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
266 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from ../inst/include/Stat.h:6,
from ../inst/include/StatController.h:6,
from StatController.cpp:1:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:120:67: required from here
120 | .method("generateNetwork",&LatentOrderLikelihood<Undirected>::generateNetwork)
| ^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:350:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
350 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:372:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
372 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:384:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
384 | for(int i=0;i<vert_order.size();i++)
| ~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'void lolog::LatentOrderLikelihood<Engine>::generateOrder(std::vector<int>&, VectorPtr) [with Engine = lolog::Directed; VectorPtr = boost::shared_ptr<std::vector<int> >]':
../inst/include/LatentOrderLikelihood.h:157:23: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
157 | this->generateOrder(vertices, model->getVertexOrder());
| ~~~~~~^~~~~~~~~~~~~
RcppModule.cpp:130:76: required from here
130 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Directed>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:72:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
72 | for(int i=0;i<y.size();i++)
| ~^~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]':
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:130:76: required from here
130 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Directed>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<predictors.size();i++){
| ~^~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:242:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
242 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:266:39: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
266 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:132:65: required from here
132 | .method("generateNetwork",&LatentOrderLikelihood<Directed>::generateNetwork)
| ^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:350:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
350 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:372:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
372 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:384:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
384 | for(int i=0;i<vert_order.size();i++)
| ~^~~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Undirected]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Undirected]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:121:26: required from 'void lolog::LatentOrderLikelihood<Engine>::setModel(const lolog::Model<Engine>&) [with Engine = lolog::Undirected]'
121 | model = mod.clone();
| ~~~~~~~~~^~
RcppModule.cpp:113:60: required from here
113 | .method("setModel",&LatentOrderLikelihood<Undirected>::setModel)
| ^~~~~~~~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::statistics(std::vector<double>&) [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:232:45: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
232 | runningModel->statistics(terms);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:245:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
245 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:247:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
247 | for(int j=0;j<stats[i]->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:233:45: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
233 | runningModel->dyadUpdate(vertex, alter, vert_order, i);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:239:47: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
239 | runningModel->rollback();
| ~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:328:43: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
328 | double llik = runningModel->logLik();
| ~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:120:67: required from here
120 | .method("generateNetwork",&LatentOrderLikelihood<Undirected>::generateNetwork)
| ^~~~~~~~~~~~~~~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Directed]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Directed]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:121:26: required from 'void lolog::LatentOrderLikelihood<Engine>::setModel(const lolog::Model<Engine>&) [with Engine = lolog::Directed]'
121 | model = mod.clone();
| ~~~~~~~~~^~
RcppModule.cpp:125:58: required from here
125 | .method("setModel",&LatentOrderLikelihood<Directed>::setModel)
| ^~~~~~~~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::statistics(std::vector<double>&) [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:232:45: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
232 | runningModel->statistics(terms);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:130:76: required from here
130 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Directed>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:245:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
245 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:247:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
247 | for(int j=0;j<stats[i]->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:233:45: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
233 | runningModel->dyadUpdate(vertex, alter, vert_order, i);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:130:76: required from here
130 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Directed>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:239:47: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
239 | runningModel->rollback();
| ~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:130:76: required from here
130 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Directed>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:328:43: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
328 | double llik = runningModel->logLik();
| ~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
RcppModule.cpp:132:65: required from here
132 | .method("generateNetwork",&LatentOrderLikelihood<Directed>::generateNetwork)
| ^~~~~~~~~~~~~~~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from ../inst/include/LatentOrderLikelihood.h:6:
../inst/include/Ranker.h: In instantiation of 'void lolog::Ranker<T, C>::shuffle(std::vector<S>&) const [with S = unsigned int; T = int; C = lolog::lt<int>]':
../inst/include/Ranker.h:84:24: required from 'void lolog::Ranker<T, C>::get_ranks(std::vector<S>&, const std::string&) const [with S = int; T = int; C = lolog::lt<int>; std::string = std::__cxx11::basic_string<char>]'
84 | shuffle(tmp2);
| ~~~~~~~^~~~~~
../inst/include/Ranker.h:148:38: required from 'void lolog::rank(const std::vector<T>&, std::vector<S>&, const std::string&) [with T = int; S = int; std::string = std::__cxx11::basic_string<char>]'
148 | { Ranker<T, lt<T> > r(v); r.get_ranks(w, method); }
| ~~~~~~~~~~~^~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:69:13: required from 'void lolog::LatentOrderLikelihood<Engine>::generateOrder(std::vector<int>&, VectorPtr) [with Engine = lolog::Undirected; VectorPtr = boost::shared_ptr<std::vector<int> >]'
69 | rank(*order, y, "random");
| ~~~~^~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:157:23: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
157 | this->generateOrder(vertices, model->getVertexOrder());
| ~~~~~~^~~~~~~~~~~~~
RcppModule.cpp:118:78: required from here
118 | .method("variationalModelFrameMulti",&LatentOrderLikelihood<Undirected>::variationalModelFrameMulti)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Ranker.h:42:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
42 | for( int i=0; i < vec.size(); i++){
| ~~^~~~~~~~~~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Directed]':
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:213:20: required from 'Class* Rcpp::Constructor<Class, T>::get_new_impl(SEXPREC**, int, Rcpp::traits::index_sequence<Is ...>) [with int ...Is = {0}; Class = lolog::LatentOrderLikelihood<lolog::Directed>; T = {lolog::Model<lolog::Directed>}; SEXP = SEXPREC*]'
213 | return new Class( as<T>(args[Is])... ) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:203:32: required from 'Class* Rcpp::Constructor<Class, T>::get_new(SEXPREC**, int) [with Class = lolog::LatentOrderLikelihood<lolog::Directed>; T = {lolog::Model<lolog::Directed>}; SEXP = SEXPREC*]'
203 | return get_new_impl(args, nargs, traits::make_index_sequence<sizeof...(T)>());
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:202:24: required from here
202 | virtual Class* get_new( SEXP* args, int nargs ){
| ^~~~~~~
../inst/include/LatentOrderLikelihood.h:92:71: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
92 | if(model->hasVertexOrder() && model->getVertexOrder()->size() != model->network()->size())
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Undirected]':
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:213:20: required from 'Class* Rcpp::Constructor<Class, T>::get_new_impl(SEXPREC**, int, Rcpp::traits::index_sequence<Is ...>) [with int ...Is = {0}; Class = lolog::LatentOrderLikelihood<lolog::Undirected>; T = {lolog::Model<lolog::Undirected>}; SEXP = SEXPREC*]'
213 | return new Class( as<T>(args[Is])... ) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:203:32: required from 'Class* Rcpp::Constructor<Class, T>::get_new(SEXPREC**, int) [with Class = lolog::LatentOrderLikelihood<lolog::Undirected>; T = {lolog::Model<lolog::Undirected>}; SEXP = SEXPREC*]'
203 | return get_new_impl(args, nargs, traits::make_index_sequence<sizeof...(T)>());
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/Module.h:202:24: required from here
202 | virtual Class* get_new( SEXP* args, int nargs ){
| ^~~~~~~
../inst/include/LatentOrderLikelihood.h:92:71: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
92 | if(model->hasVertexOrder() && model->getVertexOrder()->size() != model->network()->size())
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from StatController.cpp:3:
../inst/include/Stats.h: In instantiation of 'void lolog::EdgeCov<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2789:18: required from here
2789 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Stats.h:2791:12: warning: unused variable 'addingEdge' [-Wunused-variable]
2791 | bool addingEdge = !net.hasEdge(from,to);
| ^~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2282:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2282 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2283 | for(int j=0;j<varNames.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h:2289:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2289 | for(int i=0;i<varNames.size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h:2299:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2299 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Esp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:1879:18: required from here
1879 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1885:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1885 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2067:18: required from here
2067 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2070:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2070 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2098:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2098 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h:2107:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2107 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Gwesp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:1484:18: required from here
1484 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1491:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1491 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::EdgeCovSparse<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2974:16: required from here
2974 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Stats.h:2976:10: warning: unused variable 'addingEdge' [-Wunused-variable]
2976 | bool addingEdge = !net.hasEdge(from,to);
| ^~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::EdgeCov<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2789:18: required from here
2789 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Stats.h:2791:12: warning: unused variable 'addingEdge' [-Wunused-variable]
2791 | bool addingEdge = !net.hasEdge(from,to);
| ^~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2282:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2282 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2283 | for(int j=0;j<varNames.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h:2289:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2289 | for(int i=0;i<varNames.size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h:2299:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2299 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Esp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:1879:18: required from here
1879 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1885:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1885 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2067:18: required from here
2067 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2070:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2070 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2098:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2098 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h:2107:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2107 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Gwesp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:1484:18: required from here
1484 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1491:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1491 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::EdgeCovSparse<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2974:16: required from here
2974 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Stats.h:2976:10: warning: unused variable 'addingEdge' [-Wunused-variable]
2976 | bool addingEdge = !net.hasEdge(from,to);
| ^~~~~~~~~~
In file included from ../inst/include/Stat.h:10:
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2790:41: required from 'void lolog::EdgeCov<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]'
2790 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stats.h:2789:18: required from here
2789 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2294:19: required from 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]'
2294 | this->init(nstats);
| ~~~~~~~~~~^~~~~~~~
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/Stats.h: In instantiation of 'double lolog::AbsDiff<Engine>::dist(const lolog::BinaryNet<Engine>&, int, int) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2302:23: required from 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]'
2302 | result += dist(net, from,to);
| ^~~~
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2271 | for(int j=0;j<indices.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Directed]':
../inst/include/Stats.h:2790:41: required from 'void lolog::EdgeCov<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]'
2790 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stats.h:2789:18: required from here
2789 | virtual void dyadUpdate(const BinaryNet<Engine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2294:19: required from 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]'
2294 | this->init(nstats);
| ~~~~~~~~~~^~~~~~~~
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/Stats.h: In instantiation of 'double lolog::AbsDiff<Engine>::dist(const lolog::BinaryNet<Engine>&, int, int) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2302:23: required from 'void lolog::AbsDiff<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]'
2302 | result += dist(net, from,to);
| ^~~~
../inst/include/Stats.h:2278:18: required from here
2278 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2271 | for(int j=0;j<indices.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::TwoPath<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2854:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2854 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::AbsDiff<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::AbsDiff<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::AbsDiff<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2263:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2263 | for(int i=0;i<varNames.size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeFactor<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeFactor<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeFactor<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2686:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2686 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::SharedNbrs<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::SharedNbrs<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::SharedNbrs<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:2450:16: warning: unused variable 'netSize' [-Wunused-variable]
2450 | double netSize = actorIndex + 1.0;
| ^~~~~~~
../inst/include/Stats.h:2451:16: warning: unused variable 'totDegree' [-Wunused-variable]
2451 | double totDegree = (net.nEdges() - hasEdge) * 2.0;
| ^~~~~~~~~
../inst/include/Stats.h:2457:16: warning: unused variable 'sdegs' [-Wunused-variable]
2457 | double sdegs = 0.0;
| ^~~~~
../inst/include/Stats.h:2458:26: warning: variable 'fit' set but not used [-Wunused-but-set-variable]
2458 | NeighborIterator fit = net.begin(order[actorIndex]);
| ^~~
../inst/include/Stats.h:2459:26: warning: variable 'fend' set but not used [-Wunused-but-set-variable]
2459 | NeighborIterator fend = net.end(order[actorIndex]);
| ^~~~
../inst/include/Stats.h: In instantiation of 'void lolog::DegreeCrossProd<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::DegreeCrossProd<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::DegreeCrossProd<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1173:16: warning: unused variable 'toDeg' [-Wunused-variable]
1173 | double toDeg;
| ^~~~~
../inst/include/Stats.h:1174:16: warning: unused variable 'fromDeg' [-Wunused-variable]
1174 | double fromDeg;
| ^~~~~~~
../inst/include/Stats.h:1185:16: warning: variable 'deg' set but not used [-Wunused-but-set-variable]
1185 | double deg = net.degree(from);
| ^~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Esp<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Esp<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Esp<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1869:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1869 | for(int i=0;i<esps.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:2124:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2124 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::GeoDist<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2047:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2047 | for(int i=0;i<distCuts.size();i++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeCov<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeCov<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeCov<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:1292:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1292 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:1300:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1300 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:251:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
251 | for(int j=0;j<starDegrees.size();j++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
271 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h:283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
283 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Star<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:224:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
224 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeMatch<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMatch<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMatch<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:754:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
754 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:767:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
767 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Degree<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1084:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1084 | for(int j=0;j<degrees.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Degree<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1015:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1015 | for(int i=0;i<degrees.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeMix<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMix<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMix<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:914:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
914 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:927:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
927 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::NodeMix<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMix<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMix<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:900:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
900 | for(int i=0;i<levels.size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stats.h:901:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
901 | for(int j=i;j<levels.size();j++){
| ~^~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeLogMaxCov<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeLogMaxCov<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeLogMaxCov<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2556:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2556 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2564:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2564 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2577:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2577 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::TwoPath<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2854:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2854 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Directed]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Directed]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::AbsDiff<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::AbsDiff<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::AbsDiff<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2263:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2263 | for(int i=0;i<varNames.size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeFactor<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeFactor<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeFactor<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2686:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2686 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Esp<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Esp<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Esp<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1869:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1869 | for(int i=0;i<esps.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:2124:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2124 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::GeoDist<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2047:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2047 | for(int i=0;i<distCuts.size();i++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeCov<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeCov<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeCov<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:1292:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1292 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:1300:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1300 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:251:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
251 | for(int j=0;j<starDegrees.size();j++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
271 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h:283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
283 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Star<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:224:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
224 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Degree<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1084:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1084 | for(int j=0;j<degrees.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Degree<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1015:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1015 | for(int i=0;i<degrees.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeMatch<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeMatch<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeMatch<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:754:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
754 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:767:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
767 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Mutual<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Mutual<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Mutual<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:677:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
677 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c test_BinaryNet.cpp -o test_BinaryNet.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c test_Constraints.cpp -o test_Constraints.o
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from test_BinaryNet.cpp:3:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c test_LatentOrderLikelhood.cpp -o test_LatentOrderLikelhood.o
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from test_Constraints.cpp:5:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c test_ParamParser.cpp -o test_ParamParser.o
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
In file included from test_Constraints.cpp:11:
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setThetas(std::vector<double>) [with Engine = lolog::Undirected]':
test_Constraints.cpp:34:20: required from 'void lolog::tests::testBoundedDegree() [with Engine = lolog::Undirected]'
34 | model.setThetas(std::vector<double>(1,0));
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
test_Constraints.cpp:43:5: required from here
43 | RUN_TEST(testBoundedDegree<Undirected>());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Model.h:202:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
202 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:205:28: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
205 | if(newThetas.size()!= n){
| ~~~~~~~~~~~~~~~~^~~~
../inst/include/Model.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:212:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
212 | for(int j=0;j<vals->size();j++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::offset() [with Engine = lolog::Undirected]':
test_Constraints.cpp:36:5: required from 'void lolog::tests::testBoundedDegree() [with Engine = lolog::Undirected]'
36 | EXPECT_TRUE(model.offset().at(0) < -100000)
| ~~~~~~~~~~~~^~
test_Constraints.cpp:43:5: required from here
43 | RUN_TEST(testBoundedDegree<Undirected>());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Model.h:300:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
300 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:305:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
305 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h:307:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
307 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Undirected]':
../inst/include/Model.h:397:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
397 | calculateStatistics();
| ^~~~~~~~~~~~~~~~~~~
test_Constraints.cpp:33:20: required from 'void lolog::tests::testBoundedDegree() [with Engine = lolog::Undirected]'
33 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_Constraints.cpp:43:5: required from here
43 | RUN_TEST(testBoundedDegree<Undirected>());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Undirected]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
test_Constraints.cpp:33:20: required from 'void lolog::tests::testBoundedDegree() [with Engine = lolog::Undirected]'
33 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_Constraints.cpp:43:5: required from here
43 | RUN_TEST(testBoundedDegree<Undirected>());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from test_LatentOrderLikelhood.cpp:3:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Model.h:330:16: required from 'double lolog::Model<Engine>::vLogLik() [with Engine = lolog::Undirected]'
330 | return logLik();
| ^~~~~~
../inst/include/Model.h:329:20: required from here
329 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Undirected]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Undirected]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:118:16: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::vClone() const [with Engine = lolog::Undirected]'
118 | return clone();
| ^~~~~
../inst/include/Model.h:117:48: required from here
117 | virtual boost::shared_ptr< Model<Engine> > vClone() const{
| ^~~~~~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
In file included from test_Constraints.cpp:6:
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
In file included from ../inst/include/Stat.h:10:
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Undirected]':
../inst/include/Stats.h:170:43: required from 'void lolog::Edges<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]'
170 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:459:9: required from 'void lolog::BaseStat<Engine>::initSingle(double) [with Engine = lolog::Undirected]'
459 | init(1);
| ^~~~
../inst/include/Stats.h:166:25: required from 'void lolog::Edges<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]'
166 | this->initSingle(net.nEdges());
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Edges<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c test_Stats.cpp -o test_Stats.o
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/util.h:9,
from ../inst/include/tests.h:7,
from test_ParamParser.cpp:2:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/util.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
test_ParamParser.cpp: In function 'void lolog::tests::testParsing()':
test_ParamParser.cpp:10:5: warning: label 'Rcpp' defined but not used [-Wunused-label]
10 | Rcpp:List params = Rcpp::List::create(1, Rcpp::Named("a")=2, Rcpp::Named("b") = "ss");
| ^~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
test_LatentOrderLikelhood.cpp: In instantiation of 'void lolog::tests::lt() [with Engine = lolog::Undirected]':
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:108:12: warning: unused variable 'llik' [-Wunused-variable]
108 | double llik = model.logLik();
| ^~~~
test_LatentOrderLikelhood.cpp: In instantiation of 'void lolog::tests::lt() [with Engine = lolog::Directed]':
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:108:12: warning: unused variable 'llik' [-Wunused-variable]
108 | double llik = model.logLik();
| ^~~~
In file included from test_LatentOrderLikelhood.cpp:7:
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Undirected]':
test_LatentOrderLikelhood.cpp:108:31: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
108 | double llik = model.logLik();
| ~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setVertexOrderVector(std::vector<int>) [with Engine = lolog::Undirected]':
test_LatentOrderLikelhood.cpp:118:31: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
118 | model.setVertexOrderVector(ord);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:492:55: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | if(vertexOrder.size() != 0 && net->size() != vertexOrder.size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from test_LatentOrderLikelhood.cpp:9:
../inst/include/LatentOrderLikelihood.h: In instantiation of 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Undirected]':
test_LatentOrderLikelhood.cpp:120:41: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
120 | LatentOrderLikelihood<Engine> lol = LatentOrderLikelihood<Engine>(model);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:92:71: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
92 | if(model->hasVertexOrder() && model->getVertexOrder()->size() != model->network()->size())
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Directed]':
test_LatentOrderLikelhood.cpp:108:31: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
108 | double llik = model.logLik();
| ~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::setVertexOrderVector(std::vector<int>) [with Engine = lolog::Directed]':
test_LatentOrderLikelhood.cpp:118:31: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
118 | model.setVertexOrderVector(ord);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:492:55: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | if(vertexOrder.size() != 0 && net->size() != vertexOrder.size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Directed]':
test_LatentOrderLikelhood.cpp:120:41: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
120 | LatentOrderLikelihood<Engine> lol = LatentOrderLikelihood<Engine>(model);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:92:71: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
92 | if(model->hasVertexOrder() && model->getVertexOrder()->size() != model->network()->size())
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ../inst/include/LatentOrderLikelihood.h:6:
../inst/include/Ranker.h: In instantiation of 'void lolog::Ranker<T, C>::shuffle(std::vector<S>&) const [with S = unsigned int; T = int; C = lolog::lt<int>]':
../inst/include/Ranker.h:84:24: required from 'void lolog::Ranker<T, C>::get_ranks(std::vector<S>&, const std::string&) const [with S = int; T = int; C = lolog::lt<int>; std::string = std::__cxx11::basic_string<char>]'
84 | shuffle(tmp2);
| ~~~~~~~^~~~~~
../inst/include/Ranker.h:148:38: required from 'void lolog::rank(const std::vector<T>&, std::vector<S>&, const std::string&) [with T = int; S = int; std::string = std::__cxx11::basic_string<char>]'
148 | { Ranker<T, lt<T> > r(v); r.get_ranks(w, method); }
| ~~~~~~~~~~~^~~~~~~~~~~
test_LatentOrderLikelhood.cpp:149:9: required from here
149 | rank(vals1, ranks, "average");
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Ranker.h:42:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<unsigned int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
42 | for( int i=0; i < vec.size(); i++){
| ~~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Undirected]':
../inst/include/Model.h:397:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
397 | calculateStatistics();
| ^~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:106:20: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
106 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Undirected]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:106:20: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
106 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'void lolog::LatentOrderLikelihood<Engine>::generateOrder(std::vector<int>&, VectorPtr) [with Engine = lolog::Undirected; VectorPtr = boost::shared_ptr<std::vector<int> >]':
../inst/include/LatentOrderLikelihood.h:294:19: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
294 | this->generateOrder(vertices, model->getVertexOrder());
| ~~~~~~^~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:72:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
72 | for(int i=0;i<y.size();i++)
| ~^~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:350:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
350 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:372:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
372 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:384:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
384 | for(int i=0;i<vert_order.size();i++)
| ~^~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Directed]':
../inst/include/Model.h:397:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Directed]'
397 | calculateStatistics();
| ^~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:106:20: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
106 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Directed]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Directed]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:106:20: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
106 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'void lolog::LatentOrderLikelihood<Engine>::generateOrder(std::vector<int>&, VectorPtr) [with Engine = lolog::Directed; VectorPtr = boost::shared_ptr<std::vector<int> >]':
../inst/include/LatentOrderLikelihood.h:294:19: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
294 | this->generateOrder(vertices, model->getVertexOrder());
| ~~~~~~^~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:72:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
72 | for(int i=0;i<y.size();i++)
| ~^~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]':
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:350:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
350 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:372:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
372 | for(int m=0; m<terms.size(); m++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:384:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
384 | for(int i=0;i<vert_order.size();i++)
| ~^~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Undirected]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Undirected]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:88:26: required from 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Undirected]'
88 | model = mod.clone();
| ~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:120:41: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
120 | LatentOrderLikelihood<Engine> lol = LatentOrderLikelihood<Engine>(model);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]':
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:147:16: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrame(int, double) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
147 | return variationalModelFrameMulti(nOrders, downsampleRate, downsampleRate);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:122:44: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
122 | List result = lol.variationalModelFrame(1, .005);
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<predictors.size();i++){
| ~^~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:242:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
242 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:266:39: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
266 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::thetas() [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:310:36: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
310 | long nStats = model->thetas().size();
| ~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:181:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
181 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:186:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
186 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:188:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
188 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:321:61: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
321 | std::vector<double> terms = runningModel->statistics();
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:338:41: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
338 | runningModel->dyadUpdate(vertex, alter, vert_order, i);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::statistics(std::vector<double>&) [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:339:41: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
339 | runningModel->statistics(newTerms);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:245:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
245 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:247:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
247 | for(int j=0;j<stats[i]->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Undirected]':
../inst/include/LatentOrderLikelihood.h:347:43: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
347 | runningModel->rollback();
| ~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Undirected; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Undirected]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:166:5: required from here
166 | RUN_TEST(lt<Undirected>());
| ~~~~~~~~~~~~~~^~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Directed]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Directed]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:88:26: required from 'lolog::LatentOrderLikelihood<Engine>::LatentOrderLikelihood(lolog::Model<Engine>) [with Engine = lolog::Directed]'
88 | model = mod.clone();
| ~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:120:41: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
120 | LatentOrderLikelihood<Engine> lol = LatentOrderLikelihood<Engine>(model);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h: In instantiation of 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::modelFrameGivenOrder(double, double, std::vector<int>) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]':
../inst/include/LatentOrderLikelihood.h:164:56: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrameMulti(int, double, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
164 | result.push_back(this->modelFrameGivenOrder(downsampleRate, edgeDownsampleRate, vertices));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:147:16: required from 'Rcpp::List lolog::LatentOrderLikelihood<Engine>::variationalModelFrame(int, double) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
147 | return variationalModelFrameMulti(nOrders, downsampleRate, downsampleRate);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:122:44: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
122 | List result = lol.variationalModelFrame(1, .005);
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<double> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for(int i=0;i<predictors.size();i++){
| ~^~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:242:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
242 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:266:39: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
266 | for(int k=0; k<terms.size(); k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::thetas() [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:310:36: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
310 | long nStats = model->thetas().size();
| ~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:181:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
181 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:186:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
186 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:188:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
188 | for(int j=0;j<vals.size();j++){
| ~^~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:321:61: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
321 | std::vector<double> terms = runningModel->statistics();
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:338:41: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
338 | runningModel->dyadUpdate(vertex, alter, vert_order, i);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::statistics(std::vector<double>&) [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:339:41: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
339 | runningModel->statistics(newTerms);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:245:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
245 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:247:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
247 | for(int j=0;j<stats[i]->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Directed]':
../inst/include/LatentOrderLikelihood.h:347:43: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetworkWithOrder(std::vector<int>) [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
347 | runningModel->rollback();
| ~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/LatentOrderLikelihood.h:302:22: required from 'Rcpp::RObject lolog::LatentOrderLikelihood<Engine>::generateNetwork() [with Engine = lolog::Directed; Rcpp::RObject = Rcpp::RObject_Impl<Rcpp::PreserveStorage>]'
302 | return this->generateNetworkWithOrder(vertices);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
test_LatentOrderLikelhood.cpp:125:24: required from 'void lolog::tests::lt() [with Engine = lolog::Directed]'
125 | lol.generateNetwork();
| ~~~~~~~~~~~~~~~~~~~^~
test_LatentOrderLikelhood.cpp:167:5: required from here
167 | RUN_TEST(lt<Directed>());
| ~~~~~~~~~~~~^~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
In file included from test_LatentOrderLikelhood.cpp:4:
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Directed]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Directed]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
In file included from ../inst/include/Stat.h:10:
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Directed]':
../inst/include/Stats.h:399:43: required from 'void lolog::Triangles<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]'
399 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Undirected]':
../inst/include/Stats.h:399:43: required from 'void lolog::Triangles<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]'
399 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Directed]':
../inst/include/Stat.h:459:9: required from 'void lolog::BaseStat<Engine>::initSingle(double) [with Engine = lolog::Directed]'
459 | init(1);
| ^~~~
../inst/include/Stats.h:382:25: required from 'void lolog::Triangles<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]'
382 | this->initSingle(0.0);
| ~~~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Triangles<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:459:9: required from 'void lolog::BaseStat<Engine>::initSingle(double) [with Engine = lolog::Undirected]'
459 | init(1);
| ^~~~
../inst/include/Stats.h:382:25: required from 'void lolog::Triangles<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]'
382 | this->initSingle(0.0);
| ~~~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Triangles<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../inst/include -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/BH/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c tests.cpp -o tests.o
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/Vertex.h:8,
from ../inst/include/DirectedVertex.h:6,
from ../inst/include/BinaryNet.h:12,
from test_Stats.cpp:2:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/Vertex.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::refreshIds()':
../inst/include/BinaryNet.h:1073:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1073 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Directed::Directed(const lolog::Directed&, bool)':
../inst/include/BinaryNet.h:1109:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1109 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1175:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1175 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::emptyGraph()':
../inst/include/BinaryNet.h:1199:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1199 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1245:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1245 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1249:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1249 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Directed::randomEdge() const':
../inst/include/BinaryNet.h:1372:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1372 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Directed::edgelist() const':
../inst/include/BinaryNet.h:1435:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1435 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Directed::edgelistR(bool) const':
../inst/include/BinaryNet.h:1450:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1450 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:1458:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1458 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::continVarNames() const':
../inst/include/BinaryNet.h:1470:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1470 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeContinVariable(int)':
../inst/include/BinaryNet.h:1508:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:1515:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1515 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVarNames() const':
../inst/include/BinaryNet.h:1522:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1522 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:1533:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1533 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Directed::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:1540:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1540 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Directed::discreteVariable(int) const':
../inst/include/BinaryNet.h:1559:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1559 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:1567:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::DirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1567 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::addDiscreteVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1607:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
1607 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:1621:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1621 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Directed::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:1629:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1629 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1649:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1649 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Directed::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:1712:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1712 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::refreshIds()':
../inst/include/BinaryNet.h:1750:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1750 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In constructor 'lolog::Undirected::Undirected(const lolog::Undirected&, bool)':
../inst/include/BinaryNet.h:1789:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1789 | for(int i=0;i<net.verts.size();i++){
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::reorderVertices(std::vector<int>)':
../inst/include/BinaryNet.h:1854:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1854 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::emptyGraph()':
../inst/include/BinaryNet.h:1877:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1877 | for(int i=0;i < verts.size();i++){
| ~~^~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setAllDyadsMissing(std::vector<int>, bool)':
../inst/include/BinaryNet.h:1932:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1932 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:1939:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1939 | for(int i=0;i<nodes.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::pair<int, int> lolog::Undirected::randomEdge() const':
../inst/include/BinaryNet.h:2067:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2067 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'boost::shared_ptr<std::vector<std::pair<int, int> > > lolog::Undirected::edgelist() const':
../inst/include/BinaryNet.h:2127:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2127 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::IntegerMatrix lolog::Undirected::edgelistR(bool) const':
../inst/include/BinaryNet.h:2144:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2144 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h:2152:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2152 | for(int i=0;i<v->size();i++){
| ~^~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::continVarNames() const':
../inst/include/BinaryNet.h:2164:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::ContinAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2164 | for(int i=0;i<contMeta->size();i++)
| ~^~~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeContinVariable(int)':
../inst/include/BinaryNet.h:2203:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2203 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addContinVariable(const std::vector<double>&, lolog::ContinAttrib&)':
../inst/include/BinaryNet.h:2210:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2210 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVarNames() const':
../inst/include/BinaryNet.h:2217:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<lolog::DiscreteAttrib>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2217 | for(int i=0;i<disMeta->size();i++)
| ~^~~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::removeDiscreteVariable(int)':
../inst/include/BinaryNet.h:2228:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2228 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<int> lolog::Undirected::discreteVariableValues(int) const':
../inst/include/BinaryNet.h:2235:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2235 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'std::vector<std::__cxx11::basic_string<char> > lolog::Undirected::discreteVariable(int) const':
../inst/include/BinaryNet.h:2254:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2254 | for(int i=0;i<verts.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariable(const std::vector<int>&, lolog::DiscreteAttrib&)':
../inst/include/BinaryNet.h:2262:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::UndirectedVertex> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2262 | for(int i=0;i<verts.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::addDiscreteVariableR(Rcpp::RObject, std::string)':
../inst/include/BinaryNet.h:2300:24: warning: comparison of integer expressions of different signedness: 'std::vector<int>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2300 | if(vals.size() != this->size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h:2315:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2315 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'Rcpp::RObject lolog::Undirected::getVariableR(std::string, bool)':
../inst/include/BinaryNet.h:2323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2323 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h:2343:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2343 | for(int i=0;i<names.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/BinaryNet.h: In member function 'void lolog::Undirected::setVariableR(SEXP, std::string)':
../inst/include/BinaryNet.h:2410:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<bool>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2410 | for(int i=0;i<missing.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from ../inst/include/BinaryNet.h:15:
../inst/include/util.h: In instantiation of 'int lolog::indexOf(const T&, const std::vector<T>&) [with T = std::__cxx11::basic_string<char>]':
../inst/include/BinaryNet.h:1620:28: required from here
1620 | int index = indexOf(name,discreteVarNames());
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/util.h:79:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
79 | for(int i=0;i<vec.size();i++){
| ~^~~~~~~~~~~
test_Stats.cpp: In instantiation of 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]':
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
test_Stats.cpp:206:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
206 | for(int i=0;i<realStats.size();i++){
| ~^~~~~~~~~~~~~~~~~
test_Stats.cpp: In instantiation of 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]':
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
test_Stats.cpp:206:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
206 | for(int i=0;i<realStats.size();i++){
| ~^~~~~~~~~~~~~~~~~
In file included from test_Stats.cpp:6:
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Directed]':
test_Stats.cpp:189:25: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
189 | model.dyadUpdate(dyad.first,dyad.second, order, dyad.first);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Directed]':
test_Stats.cpp:197:27: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
197 | model.rollback();
| ~~~~~~~~~~~~~~^~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Directed]':
test_Stats.cpp:202:48: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
202 | vector<double> mcmcStats = model.statistics();
| ~~~~~~~~~~~~~~~~^~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Directed]':
test_Stats.cpp:203:30: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
203 | model.calculateStatistics();
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::dyadUpdate(int&, int&, std::vector<int>&, int&) [with Engine = lolog::Undirected]':
test_Stats.cpp:189:25: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
189 | model.dyadUpdate(dyad.first,dyad.second, order, dyad.first);
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
420 | for(int k=0;k<stats.size();k++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:423:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
423 | for(int k=0;k<offsets.size();k++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::rollback() [with Engine = lolog::Undirected]':
test_Stats.cpp:197:27: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
197 | model.rollback();
| ~~~~~~~~~~~~~~^~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:444:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
444 | for(int k=0;k<stats.size();k++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:446:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
446 | for(int k=0;k<offsets.size();k++)
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'std::vector<double> lolog::Model<Engine>::statistics() [with Engine = lolog::Undirected]':
test_Stats.cpp:202:48: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
202 | vector<double> mcmcStats = model.statistics();
| ~~~~~~~~~~~~~~~~^~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:226:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
226 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:231:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
231 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:233:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | for(int j=0;j<stats.at(i)->vStatistics().size();j++){
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateStatistics() [with Engine = lolog::Undirected]':
test_Stats.cpp:203:30: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
203 | model.calculateStatistics();
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:405:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
405 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Directed]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Directed]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
test_Stats.cpp:176:20: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
176 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'void lolog::Model<Engine>::calculateOffsets() [with Engine = lolog::Undirected]':
../inst/include/Model.h:398:9: required from 'void lolog::Model<Engine>::calculate() [with Engine = lolog::Undirected]'
398 | calculateOffsets();
| ^~~~~~~~~~~~~~~~
test_Stats.cpp:176:20: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
176 | model.calculate();
| ~~~~~~~~~~~~~~~^~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Model.h:414:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
414 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
In file included from test_Stats.cpp:3:
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Directed]':
../inst/include/Stats.h:214:19: required from 'lolog::Star<Engine>::Star(Rcpp::List) [with Engine = lolog::Directed; Rcpp::List = Rcpp::Vector<19>]'
214 | this->init(starDegrees.size());
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:171:31: required from 'lolog::Stat<NetworkEngine, StatEngine>::Stat(Rcpp::List) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>; Rcpp::List = Rcpp::Vector<19>]'
171 | Stat(Rcpp::List params) : stat(params){}
| ^~~~~~~~~~~~
test_Stats.cpp:119:17: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Directed; std::string = std::__cxx11::basic_string<char>]'
119 | new Stat<Engine, Star<Engine> >(l));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_Stats.cpp:218:5: required from here
218 | RUN_TEST(changeStatTest<Directed>("NodeMatch"));
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
../inst/include/Stat.h: In instantiation of 'void lolog::BaseStat<Engine>::init(int) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:214:19: required from 'lolog::Star<Engine>::Star(Rcpp::List) [with Engine = lolog::Undirected; Rcpp::List = Rcpp::Vector<19>]'
214 | this->init(starDegrees.size());
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:171:31: required from 'lolog::Stat<NetworkEngine, StatEngine>::Stat(Rcpp::List) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>; Rcpp::List = Rcpp::Vector<19>]'
171 | Stat(Rcpp::List params) : stat(params){}
| ^~~~~~~~~~~~
test_Stats.cpp:119:17: required from 'void lolog::tests::changeStatTest(std::string) [with Engine = lolog::Undirected; std::string = std::__cxx11::basic_string<char>]'
119 | new Stat<Engine, Star<Engine> >(l));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test_Stats.cpp:230:5: required from here
230 | RUN_TEST(changeStatTest<Undirected>("Triangles"));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
../inst/include/Stat.h:454:32: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
454 | if(this->thetas.size() != size)
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~
In file included from test_Stats.cpp:4:
../inst/include/Stats.h: In instantiation of 'void lolog::Esp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:1879:18: required from here
1879 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1885:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1885 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2067:18: required from here
2067 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2070:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2070 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2098:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2098 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h:2107:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2107 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Gwesp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stats.h:1484:18: required from here
1484 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1491:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1491 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Esp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:1879:18: required from here
1879 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1885:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1885 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:2067:18: required from here
2067 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:2070:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2070 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:2098:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2098 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Stats.h:2107:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2107 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Gwesp<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stats.h:1484:18: required from here
1484 | virtual void calculate(const BinaryNet<Engine>& net){
| ^~~~~~~~~
../inst/include/Stats.h:1491:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1491 | for(int i=0;i<el->size();i++){
| ~^~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Model.h:330:16: required from 'double lolog::Model<Engine>::vLogLik() [with Engine = lolog::Undirected]'
330 | return logLik();
| ^~~~~~
../inst/include/Model.h:329:20: required from here
329 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'double lolog::Model<Engine>::logLik() [with Engine = lolog::Directed]':
../inst/include/Model.h:330:16: required from 'double lolog::Model<Engine>::vLogLik() [with Engine = lolog::Directed]'
330 | return logLik();
| ^~~~~~
../inst/include/Model.h:329:20: required from here
329 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Model.h:320:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
320 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Model.h:323:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
323 | for(int i=0;i<offsets.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Undirected]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Undirected]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:118:16: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::vClone() const [with Engine = lolog::Undirected]'
118 | return clone();
| ^~~~~
../inst/include/Model.h:117:48: required from here
117 | virtual boost::shared_ptr< Model<Engine> > vClone() const{
| ^~~~~~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Undirected> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::TwoPath<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2854:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2854 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
In file included from ../inst/include/Stat.h:10:
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Esp<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Esp<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Esp<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1869:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1869 | for(int i=0;i<esps.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:2124:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2124 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::GeoDist<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::GeoDist<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2047:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2047 | for(int i=0;i<distCuts.size();i++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeFactor<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeFactor<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeFactor<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2686:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2686 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeCov<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeCov<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeCov<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:1292:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1292 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:1300:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1300 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:251:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
251 | for(int j=0;j<starDegrees.size();j++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
271 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h:283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
283 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Star<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Star<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:224:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
224 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::DegreeCrossProd<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::DegreeCrossProd<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::DegreeCrossProd<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1173:16: warning: unused variable 'toDeg' [-Wunused-variable]
1173 | double toDeg;
| ^~~~~
../inst/include/Stats.h:1174:16: warning: unused variable 'fromDeg' [-Wunused-variable]
1174 | double fromDeg;
| ^~~~~~~
../inst/include/Stats.h:1185:16: warning: variable 'deg' set but not used [-Wunused-but-set-variable]
1185 | double deg = net.degree(from);
| ^~~
../inst/include/Stats.h: In instantiation of 'void lolog::Degree<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1084:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1084 | for(int j=0;j<degrees.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Degree<Engine>::statNames() [with Engine = lolog::Undirected]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Undirected; StatEngine = lolog::Degree<lolog::Undirected>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1015:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1015 | for(int i=0;i<degrees.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeMatch<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Undirected]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMatch<lolog::Undirected>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::NodeMatch<lolog::Undirected>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:754:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
754 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:767:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
767 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Model.h: In instantiation of 'lolog::Model<Engine>::Model(const lolog::Model<Engine>&, bool) [with Engine = lolog::Directed]':
../inst/include/Model.h:114:51: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::clone() const [with Engine = lolog::Directed]'
114 | return boost::shared_ptr< Model<Engine> >(new Model<Engine>(*this, true));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Model.h:118:16: required from 'boost::shared_ptr<lolog::Model<Engine> > lolog::Model<Engine>::vClone() const [with Engine = lolog::Directed]'
118 | return clone();
| ^~~~~
../inst/include/Model.h:117:48: required from here
117 | virtual boost::shared_ptr< Model<Engine> > vClone() const{
| ^~~~~~
../inst/include/Model.h:74:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractStat<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
74 | for(int i=0;i<stats.size();i++)
| ~^~~~~~~~~~~~~
../inst/include/Model.h:76:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> >, std::allocator<boost::shared_ptr<lolog::AbstractOffset<lolog::Directed> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
76 | for(int i=0;i<offsets.size();i++)
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::TwoPath<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2854:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2854 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'std::vector<double> lolog::BaseStat<Engine>::values() [with Engine = lolog::Directed]':
../inst/include/Stat.h:394:27: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::values() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
394 | return stat.values();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:390:16: required from 'std::vector<double> lolog::Stat<NetworkEngine, StatEngine>::vValues() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
390 | return values();
| ^~~~~~
../inst/include/Stat.h:389:33: required from here
389 | virtual std::vector<double> vValues(){
| ^~~~~~~
../inst/include/Stat.h:482:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
482 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h: In instantiation of 'double lolog::BaseStat<Engine>::logLik() [with Engine = lolog::Directed]':
../inst/include/Stat.h:405:27: required from 'double lolog::Stat<NetworkEngine, StatEngine>::logLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
405 | return stat.logLik();
| ~~~~~~~~~~~^~
../inst/include/Stat.h:401:16: required from 'double lolog::Stat<NetworkEngine, StatEngine>::vLogLik() [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
401 | return logLik();
| ^~~~~~
../inst/include/Stat.h:400:20: required from here
400 | virtual double vLogLik(){
| ^~~~~~~
../inst/include/Stat.h:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
492 | for(int i=0;i<this->stats.size();i++)
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::rollback(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:302:22: required from 'void lolog::Stat<NetworkEngine, StatEngine>::rollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
302 | stat.rollback(net);
| ~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:298:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vRollback(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
298 | rollback(net);
| ^~~~~~~~
../inst/include/Stat.h:297:18: required from here
297 | virtual void vRollback(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~
../inst/include/Offset.h:422:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
422 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Esp<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Esp<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Esp<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1869:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1869 | for(int i=0;i<esps.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::GeoDist<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:2124:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2124 | for(int j=0;j<distCuts.size();j++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::GeoDist<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::GeoDist<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:2047:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2047 | for(int i=0;i<distCuts.size();i++){
| ~^~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeFactor<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeFactor<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeFactor<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:2686:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
2686 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeCov<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeCov<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeCov<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:1292:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1292 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:1300:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1300 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:251:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
251 | for(int j=0;j<starDegrees.size();j++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::Star<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:271:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
271 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h:283:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
283 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Star<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Star<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:224:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
224 | for(int i=0;i<starDegrees.size();i++){
| ~^~~~~~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::DegreeCrossProd<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::DegreeCrossProd<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::DegreeCrossProd<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1173:16: warning: unused variable 'toDeg' [-Wunused-variable]
1173 | double toDeg;
| ^~~~~
../inst/include/Stats.h:1174:16: warning: unused variable 'fromDeg' [-Wunused-variable]
1174 | double fromDeg;
| ^~~~~~~
../inst/include/Stats.h:1185:16: warning: variable 'deg' set but not used [-Wunused-but-set-variable]
1185 | double deg = net.degree(from);
| ^~~
../inst/include/Stats.h: In instantiation of 'void lolog::Degree<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Stats.h:1084:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1084 | for(int j=0;j<degrees.size();j++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'std::vector<std::__cxx11::basic_string<char> > lolog::Degree<Engine>::statNames() [with Engine = lolog::Directed]':
../inst/include/Stat.h:313:56: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::statNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
313 | std::vector<std::string> names = stat.statNames();
| ~~~~~~~~~~~~~~^~
../inst/include/Stat.h:309:16: required from 'std::vector<std::__cxx11::basic_string<char> > lolog::Stat<NetworkEngine, StatEngine>::vStatNames() [with NetworkEngine = lolog::Directed; StatEngine = lolog::Degree<lolog::Directed>]'
309 | return statNames();
| ^~~~~~~~~
../inst/include/Stat.h:308:38: required from here
308 | virtual std::vector<std::string> vStatNames(){
| ^~~~~~~~~~
../inst/include/Stats.h:1015:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1015 | for(int i=0;i<degrees.size();i++){
| ~^~~~~~~~~~~~~~~
../inst/include/Stats.h: In instantiation of 'void lolog::NodeMatch<Engine>::calculate(const lolog::BinaryNet<Engine>&) [with Engine = lolog::Directed]':
../inst/include/Stat.h:228:23: required from 'void lolog::Stat<NetworkEngine, StatEngine>::calculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeMatch<lolog::Directed>]'
228 | stat.calculate(net);
| ~~~~~~~~~~~~~~^~~~~
../inst/include/Stat.h:224:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vCalculate(const lolog::BinaryNet<Engine>&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::NodeMatch<lolog::Directed>]'
224 | calculate(net);
| ^~~~~~~~~
../inst/include/Stat.h:223:18: required from here
223 | virtual void vCalculate(const BinaryNet<NetworkEngine>& net){
| ^~~~~~~~~~
../inst/include/Stats.h:754:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
754 | for(int i=0;i<vars.size();i++){
| ~^~~~~~~~~~~~
../inst/include/Stats.h:767:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<int, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
767 | for(int i=0;i<edges->size();i++){
| ~^~~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Undirected]':
../inst/include/Stats.h:2865:43: required from 'void lolog::TwoPath<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Undirected]'
2865 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Undirected; StatEngine = lolog::TwoPath<lolog::Undirected>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
../inst/include/Offset.h: In instantiation of 'void lolog::BaseOffset<Engine>::resetLastStats() [with Engine = lolog::Directed]':
../inst/include/Stats.h:2865:43: required from 'void lolog::TwoPath<Engine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with Engine = lolog::Directed]'
2865 | BaseOffset<Engine>::resetLastStats();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
../inst/include/Stat.h:247:24: required from 'void lolog::Stat<NetworkEngine, StatEngine>::dyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
247 | stat.dyadUpdate(net,from,to,order,actorIndex);
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
../inst/include/Stat.h:243:9: required from 'void lolog::Stat<NetworkEngine, StatEngine>::vDyadUpdate(const lolog::BinaryNet<Engine>&, const int&, const int&, const std::vector<int>&, const int&) [with NetworkEngine = lolog::Directed; StatEngine = lolog::TwoPath<lolog::Directed>]'
243 | dyadUpdate(net,from,to,order,actorIndex);
| ^~~~~~~~~~
../inst/include/Stat.h:242:18: required from here
242 | virtual void vDyadUpdate(const BinaryNet<NetworkEngine>& net,const int &from,const int &to,const std::vector<int> &order,const int &actorIndex){
| ^~~~~~~~~~~
../inst/include/Offset.h:416:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
416 | for(int i=0;i<stats.size();i++){
| ~^~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:18,
from /data/gannet/ripley/R/test-dev/BH/include/boost/shared_ptr.hpp:17,
from ../inst/include/util.h:9,
from ../inst/include/tests.h:7,
from tests.cpp:1:
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/local/gcc14/include/c++/14.2.0/memory:78,
from ../inst/include/util.h:7:
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:251:65: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
251 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:508:31: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
508 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:521:22: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
521 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:604:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
604 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:613:34: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
613 | shared_ptr & operator=( std::auto_ptr<Y> && r )
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)':
/data/gannet/ripley/R/test-dev/BH/include/boost/smart_ptr/shared_ptr.hpp:615:38: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
615 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
| ^~~~~~~~
/usr/local/gcc14/include/c++/14.2.0/bits/unique_ptr.h:59:28: note: declared here
59 | template<typename> class auto_ptr;
| ^~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o lolog.so RcppExports.o RcppModule.o StatController.o main.o test_BinaryNet.o test_Constraints.o test_LatentOrderLikelhood.o test_ParamParser.o test_Stats.o tests.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lolog/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/lolog/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/lolog/src'
installing to /data/gannet/ripley/R/packages/tests-devel/lolog.Rcheck/00LOCK-lolog/00new/lolog/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘[’ with signature ‘"Rcpp_DirectedNet"’: no definition for class “Rcpp_DirectedNet”
in method for ‘[’ with signature ‘"Rcpp_UndirectedNet"’: no definition for class “Rcpp_UndirectedNet”
in method for ‘[<-’ with signature ‘"Rcpp_DirectedNet"’: no definition for class “Rcpp_DirectedNet”
in method for ‘[<-’ with signature ‘"Rcpp_UndirectedNet"’: no definition for class “Rcpp_UndirectedNet”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lolog)