• using R Under development (unstable) (2025-02-19 r87756)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)     GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
• running under: Fedora Linux 40 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘insight/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘insight’ version ‘1.0.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘insight’ can be installed ... [54s/163s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [137s/406s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [39s/101s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [10m/13m] ERROR   Running ‘testthat.R’ [10m/13m] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(insight)   > test_check("insight")   Starting 2 test processes   Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session.   Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session.   [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ]      ══ Skipped tests (72) ══════════════════════════════════════════════════════════   • On CRAN (64): 'test-GLMMadaptive.R:1:1', 'test-averaging.R:3:1',     'test-brms.R:1:1', 'test-brms_aterms.R:1:1',     'test-brms_gr_random_effects.R:1:1', 'test-brms_missing.R:1:1',     'test-brms_von_mises.R:1:1', 'test-blmer.R:249:3',     'test-clean_names.R:103:3', 'test-clean_parameters.R:2:3',     'test-clean_parameters.R:35:3', 'test-clmm.R:165:3', 'test-cpglmm.R:145:3',     'test-export_table.R:4:3', 'test-export_table.R:8:3',     'test-export_table.R:106:3', 'test-export_table.R:133:3',     'test-export_table.R:164:3', 'test-export_table.R:193:3',     'test-export_table.R:205:3', 'test-export_table.R:233:3',     'test-find_random.R:27:3', 'test-format_table.R:1:1',     'test-format_table_ci.R:71:3', 'test-gam.R:1:1', 'test-find_smooth.R:31:3',     'test-get_data.R:385:1', 'test-get_loglikelihood.R:93:3',     'test-get_loglikelihood.R:158:3', 'test-get_predicted.R:2:1',     'test-get_priors.R:3:3', 'test-get_varcov.R:40:3',     'test-is_converged.R:28:1', 'test-lme.R:34:3', 'test-lme.R:210:3',     'test-glmmTMB.R:71:3', 'test-glmmTMB.R:755:3', 'test-glmmTMB.R:787:3',     'test-marginaleffects.R:1:1', 'test-mgcv.R:1:1', 'test-mipo.R:1:1',     'test-mvrstanarm.R:1:1', 'test-panelr-asym.R:142:3', 'test-panelr.R:272:3',     'test-phylolm.R:5:1', 'test-r2_nakagawa_bernoulli.R:1:1',     'test-r2_nakagawa_beta.R:1:1', 'test-r2_nakagawa_binomial.R:1:1',     'test-r2_nakagawa_gamma.R:1:1', 'test-r2_nakagawa_linear.R:1:1',     'test-r2_nakagawa_negbin.R:1:1', 'test-r2_nakagawa_negbin_zi.R:1:1',     'test-r2_nakagawa_ordered_beta.R:1:1', 'test-r2_nakagawa_poisson.R:1:1',     'test-r2_nakagawa_poisson_zi.R:1:1',     'test-r2_nakagawa_truncated_poisson.R:1:1', 'test-r2_nakagawa_tweedie.R:1:1',     'test-rlmer.R:259:3', 'test-rqss.R:1:1', 'test-rstanarm.R:1:1',     'test-spatial.R:1:1', 'test-svylme.R:1:1', 'test-vgam.R:1:1',     'test-weightit.R:1:1'   • On Linux (3): 'test-BayesFactorBF.R:1:1', 'test-MCMCglmm.R:1:1',     'test-get_data.R:150:3'   • Package `logistf` is loaded and breaks `mmrm::mmrm()` (1): 'test-mmrm.R:4:1'   • TRUE is TRUE (1): 'test-fixest.R:2:1'   • works interactively (2): 'test-coxph-panel.R:34:3', 'test-coxph.R:38:3'   • {bigglm} is not installed (1): 'test-model_info.R:24:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-get_loglikelihood.R:216:3'): get_loglikelihood - gamm4 ───────   as.numeric(ll) (`actual`) not equal to -101.1107 (`expected`).        `actual`: -99.1   `expected`: -101.1   ── Failure ('test-get_variance.R:49:3'): get_variance-1 ────────────────────────   v1$var.intercept (`actual`) not equal to c(Subject = 612.10016) (`expected`).        `actual`: 593.3   `expected`: 612.1   ── Failure ('test-get_variance.R:53:3'): get_variance-1 ────────────────────────   v1$var.slope (`actual`) not equal to c(Subject.Days = 35.07171) (`expected`).        `actual`: 593.3   `expected`: 35.1   ── Failure ('test-get_variance.R:60:3'): get_variance-2 ────────────────────────   v2$var.intercept (`actual`) not equal to c(Subject = 627.56905) (`expected`).        `actual`: 593.3   `expected`: 627.6   ── Failure ('test-get_variance.R:64:3'): get_variance-2 ────────────────────────   v2$var.slope (`actual`) not equal to c(Subject.Days = 35.85838) (`expected`).        `actual`: 593.3   `expected`: 35.9   ── Failure ('test-get_variance.R:71:3'): get_variance-3 ────────────────────────   v3$var.intercept (`actual`) not equal to c(subgrp.grp.1 = 0, Subject = 662.52047, grp.1 = 0) (`expected`).      `actual` is NULL   `expected` is a double vector (0, 662.52047, 0)   ── Failure ('test-get_variance.R:79:3'): get_variance-3 ────────────────────────   v3$var.slope (`actual`) not equal to c(Subject.Days = 34.25771, subgrp.grp.Days = 7.88485, grp.Days = 0) (`expected`).      `actual` is NULL   `expected` is a double vector (34.25771, 7.88485, 0)   ── Failure ('test-get_variance.R:91:3'): get_variance-4 ────────────────────────   v4$var.intercept (`actual`) not equal to c(Subject = 1378.17851) (`expected`).        `actual`: 811.1   `expected`: 1378.2   ── Failure ('test-get_variance.R:99:3'): get_variance-5 ────────────────────────   v5$var.intercept (`actual`) not equal to c(`subgrp:grp` = 38.76069, Subject = 1377.50569, grp = 3.32031) (`expected`).        `actual`: 654.2 654.2 654.2   `expected`: 38.8 1377.5 3.3   ── Failure ('test-get_variance.R:112:3'): get_variance-6 ───────────────────────   v6$var.intercept (`actual`) not equal to c(plate = 0.71691) (`expected`).        `actual`: 0.13   `expected`: 0.72   ── Failure ('test-get_variance.R:113:3'): get_variance-6 ───────────────────────   v6$var.random (`actual`) not equal to 0.71691 (`expected`).        `actual`: 0.13   `expected`: 0.72   ── Failure ('test-get_variance.R:124:3'): get_variance-7 ───────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 593.3   `expected$var.random`: 627.6        `actual$var.residual`: 593.3   `expected$var.residual`: 653.6        `actual$var.distribution`: 593.3   `expected$var.distribution`: 653.6        `actual$var.intercept`: 593.3   `expected$var.intercept`: 627.6        `actual$var.slope`: 593.3   `expected$var.slope`: 35.9   ── Failure ('test-get_variance.R:144:3'): get_variance-8 ───────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 21856.9   `expected$var.random`: 1502.2        `actual$var.residual`: 766.9   `expected$var.residual`: 842.0        `actual$var.distribution`: 766.9   `expected$var.distribution`: 842.0        `actual$var.slope`: 766.9   `expected$var.slope`: 52.7   ── Failure ('test-get_variance.R:169:3'): get_variance-9 ───────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 1264.6   `expected$var.random`: 1711.4        `actual$var.residual`: 790.4   `expected$var.residual`: 748.8        `actual$var.distribution`: 790.4   `expected$var.distribution`: 748.8        `actual$var.intercept`: 790.4   `expected$var.intercept`: 663.3        `actual$var.slope`: 790.4 790.4   `expected$var.slope`: 882.4 1415.7      actual$cor.slope_intercept vs expected$cor.slope_intercept                                            [,1]   - actual$cor.slope_intercept[1, ] 0.0000000   + expected$cor.slope_intercept[1, ] 0.3611731   - actual$cor.slope_intercept[2, ] 0.0000000   + expected$cor.slope_intercept[2, ] 0.3318785        `actual$cor.slopes`: 0.00   `expected$cor.slopes`: 0.85   ── Failure ('test-get_variance.R:198:3'): get_variance-10 ──────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).      `actual` is length 8   `expected` is length 7          names(actual) | names(expected)   [1] "var.fixed" | "var.fixed" [1]   [2] "var.random" -   [3] "var.residual" | "var.residual" [2]   [4] "var.distribution" | "var.distribution" [3]   [5] "var.dispersion" | "var.dispersion" [4]      `actual$var.random` is a double vector (739.145250002286)   `expected$var.random` is absent          names(actual$var.slope) | names(expected$var.slope)   [1] "Subject.1.Days2(3,6]" -   [2] "Subject.1.Days2(6,10]" -   [3] "Subject.Days2(-1,3]" | "Subject.Days2(-1,3]" [1]   [4] "Subject.Days2(3,6]" | "Subject.Days2(3,6]" [2]   [5] "Subject.Days2(6,10]" | "Subject.Days2(6,10]" [3]          actual$var.slope | expected$var.slope   [1] 739.145250002286 - 0 [1]   [2] 739.145250002286 - 994.015865559888 [2]   [3] 739.145250002286 - 1545.72576115283 [3]   [4] 739.145250002286 -   [5] 739.145250002286 -          names(actual$cor.slopes) | names(expected$cor.slopes)   [1] "Subject.1.Days2(-1,3]-Days2(3,6]" -   [2] "Subject.1.Days2(-1,3]-Days2(6,10]" -   [3] "Subject.1.Days2(3,6]-Days2(6,10]" | "Subject.1.Days2(3,6]-Days2(6,10]" [1]        `actual$cor.slopes`: 0 0 0   `expected$cor.slopes`: 0.859480774219098   ── Failure ('test-get_variance.R:222:3'): get_variance-11 ──────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 589.0   `expected$var.random`: 1446.1        `actual$var.residual`: 981.6   `expected$var.residual`: 748.8        `actual$var.distribution`: 981.6   `expected$var.distribution`: 748.8        `actual$var.slope`: 981.6 981.6 981.6   `expected$var.slope`: 663.3 2098.2 2722.2        `actual$cor.slopes`: 0.00 0.00 0.00   `expected$cor.slopes`: 0.80 0.73 0.92   ── Failure ('test-get_variance.R:250:3'): get_variance-12 ──────────────────────   `vmodel` (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 589.0   `expected$var.random`: 1446.1        `actual$var.residual`: 981.6   `expected$var.residual`: 748.8        `actual$var.distribution`: 981.6   `expected$var.distribution`: 748.8        `actual$var.slope`: 981.6 981.6 981.6   `expected$var.slope`: 663.3 2098.2 2722.2        `actual$cor.slopes`: 0.00 0.00 0.00   `expected$cor.slopes`: 0.80 0.73 0.92   ── Failure ('test-get_variance.R:283:3'): get_variance-cat_random_slope ────────   vc$cor.slopes (`actual`) not equal to c(...) (`expected`).        `actual`: 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0   `expected`: 1.0 1.0 1.0 1.0 1.0 1.0 -1.0 -1.0 -1.0 -1.0   ── Failure ('test-get_variance.R:326:3'): random effects CIs, simple slope ─────   `vc` (`actual`) not equal to list(...) (`expected`).        `actual[[1]]`: 935.7   `expected[[1]]`: 921.9        `actual[[2]]`: 17808.7   `expected[[2]]`: 1068.0        `actual[[3]]`: 624.9   `expected[[3]]`: 764.5        `actual[[4]]`: 624.9   `expected[[4]]`: 764.5        `actual[[6]]`: 624.9 624.9   `expected[[6]]`: 37.5 27.6        `actual[[7]]`: 0.00   `expected[[7]]`: 0.46   ── Failure ('test-get_variance.R:353:3'): random effects CIs, poly slope ───────   vc$cor.slopes (`actual`) not equal to c(`replicate.poly(temp, 2)1-poly(temp, 2)2` = 0.940016422944175) (`expected`).        `actual`: 0.00   `expected`: 0.94   ── Failure ('test-is_converged.R:23:3'): is_converged ──────────────────────────   is_converged(model) is not TRUE      `actual`: FALSE   `expected`: TRUE   ── Failure ('test-lmer.R:60:3'): get_df ────────────────────────────────────────   get_df(m1, type = "satterthwaite") (`actual`) not equal to c(`(Intercept)` = 16.99973, Days = 16.99998) (`expected`).        `actual`: 18.1 115.7   `expected`: 17.0 17.0   ── Failure ('test-lmer.R:334:3'): get_variance ─────────────────────────────────   get_variance(m1) (`actual`) not equal to list(...) (`expected`).        `actual$var.random`: 17503.7   `expected$var.random`: 1698.1        `actual$var.slope`: 593.3   `expected$var.slope`: 35.1   ── Failure ('test-lmer.R:353:3'): get_variance ─────────────────────────────────   get_variance_random(m1) (`actual`) not equal to c(var.random = 1698.084) (`expected`).        `actual`: 17503.7   `expected`: 1698.1   ── Failure ('test-lmer.R:377:3'): get_variance ─────────────────────────────────   get_variance_slope(m1) (`actual`) not equal to c(var.slope.Subject.Days = 35.07171) (`expected`).        `actual`: 593.3   `expected`: 35.1   ── Failure ('test-lmer.R:388:3'): get_variance ─────────────────────────────────   suppressWarnings(get_variance(m2)) (`actual`) not equal to list(...) (`expected`).      `actual` is length 6   `expected` is length 5          names(actual) | names(expected)   [1] "var.fixed" | "var.fixed" [1]   [2] "var.random" -   [3] "var.residual" | "var.residual" [2]   [4] "var.distribution" | "var.distribution" [3]   [5] "var.dispersion" | "var.dispersion" [4]      `actual$var.random` is a double vector (2058.53584626217)   `expected$var.random` is absent        `actual$var.residual`: 686.2   `expected$var.residual`: 941.8        `actual$var.distribution`: 686.2   `expected$var.distribution`: 941.8        `actual$var.intercept`: 686.2 686.2 686.2   `expected$var.intercept`: 0.0 1357.4 24.4   ── Failure ('test-lmer.R:558:3'): get_predicted_ci: warning when model matrix and varcovmat do not match ──   head(data.frame(p)$Predicted) (`actual`) not equal to known$Predicted (`expected`).        `actual`: 37.586 47.556 56.800 65.318 73.111 80.177   `expected`: 37.534 47.957 58.789 70.029 81.677 93.735      [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [32s/87s] OK
• checking PDF version of manual ... [17s/46s] OK
• checking HTML version of manual ... [11s/28s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR