* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/hacksaw.Rcheck’ * using R Under development (unstable) (2025-02-26 r87827) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘hacksaw/DESCRIPTION’ ... OK * this is package ‘hacksaw’ version ‘0.0.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘hacksaw’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/hacksaw-00install.html' for details. * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s/14s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking LazyData ... INFO 'LazyData' is specified without a 'data' directory * checking examples ... [3s/13s] ERROR Running examples in ‘hacksaw-Ex.R’ failed The error most likely occurred in: > ### Name: keep_pattern > ### Title: Grep, keep or discard a list or vector by pattern > ### Aliases: keep_pattern discard_pattern > > ### ** Examples > > l <- list("David", "Daniel", "Damien", "Eric", "Jared", "Zach") > l %>% keep_pattern("^D") Error in `purrr::keep()`: ℹ In index: 1. Caused by error in `grepl()`: ! NA in coercion to Rboolean Backtrace: ▆ 1. ├─l %>% keep_pattern("^D") 2. ├─hacksaw::keep_pattern(., "^D") 3. │ └─purrr::keep(x, ~grepl(pattern = pattern, x = .x, ...)) 4. │ └─purrr:::where_if(.x, .p, ...) 5. │ └─purrr:::map_(.x, .p, ..., .type = "logical", .purrr_error_call = .purrr_error_call) 6. │ ├─purrr:::with_indexed_errors(...) 7. │ │ └─base::withCallingHandlers(...) 8. │ ├─purrr:::call_with_cleanup(...) 9. │ └─purrr (local) .f(.x[[i]], ...) 10. │ └─hacksaw (local) .fn(...) 11. │ └─base::grepl(pattern = pattern, x = .x, ...) 12. └─base::.handleSimpleError(...) 13. └─purrr (local) h(simpleError(msg, call)) 14. └─cli::cli_abort(...) 15. └─rlang::abort(...) Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [3s/12s] OK Running ‘testthat.R’ [2s/10s] * checking PDF version of manual ... [7s/26s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR