* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/geostatsp.Rcheck’
* using R Under development (unstable) (2025-07-07 r88391)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
    GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘geostatsp/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘geostatsp’ version ‘2.0.8’
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘RandomFields’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geostatsp’ can be installed ... [71s/167s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/geostatsp-00install.html' for details.
* used C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [14s/41s] OK
* checking whether the package can be loaded with stated dependencies ... [14s/35s] OK
* checking whether the package can be unloaded cleanly ... [14s/36s] OK
* checking whether the namespace can be loaded with stated dependencies ... [14s/28s] OK
* checking whether the namespace can be unloaded cleanly ... [14s/31s] OK
* checking loading without being on the library search path ... [16s/38s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [91s/205s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [14s/30s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking include directives in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [0m/30m] ERROR
Running examples in ‘geostatsp-Ex.R’ failed
The error most likely occurred in:

> ### Name: RFsimulate
> ### Title: Simulation of Random Fields
> ### Aliases: RFsimulate modelRandomFields RFsimulate RFsimulate-methods
> ###   RFsimulate,ANY,SpatRaster-method RFsimulate,numeric,SpatRaster-method
> ###   RFsimulate,numeric,SpatVector-method
> ###   RFsimulate,RMmodel,SpatVector-method
> ###   RFsimulate,RMmodel,SpatRaster-method
> ###   RFsimulate,matrix,SpatRaster-method
> ###   RFsimulate,matrix,SpatVector-method RFsimulate,data.frame,ANY-method
> ### Keywords: spatial
> 
> ### ** Examples
> 
> library('geostatsp')
> 
> # exclude this line to use the RandomFields package
> options(useRandomFields = FALSE)
> 
> model1 <- c(var=5, range=1,shape=0.5)
> 
> 
> myraster = rast(nrows=20,ncols=30,extent = ext(0,6,0,4), 
+ 	crs="+proj=utm +zone=17 +datum=NAD27 +units=m +no_defs")
> 
> set.seed(0) 
> 
> simu <- RFsimulate(model1, x=myraster, n=3)
install the RandomFields package for faster simulations
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [0m/90m] ERROR
  Running ‘RFsimulate.R’ [90m/48m]
  Running ‘krige.R’ [22s/22s]
  Running ‘lgcp.R’ [85s/65s]
  Running ‘lgm.R’ [64s/62s]
  Running ‘lgmRaster.R’ [0m/40m]
  Running ‘likfitLgm.R’
Running the tests in ‘tests/RFsimulate.R’ failed.
Complete output:
  > library("geostatsp")
  Loading required package: Matrix
  Loading required package: terra
  terra 1.8.54
  > 
  > model <- c(var=5, range=20,shape=0.5)
  > 
  > # any old crs
  > theCrs = "+proj=utm +zone=17 +datum=NAD27 +units=m +no_defs"
  > 
  > # don't test using the randomFields package, it's currently broken on some R builds
  > options(useRandomFields = FALSE)
  > 
  >   myraster = rast(nrows=20,ncols=20,extent = ext(100,110,100,110), 
  +     crs=theCrs)
  > 
  > set.seed(0)
  > simu = RFsimulate(model = rbind(a=model, b=model+0.1), 
  +   x=myraster, n=4
  + )
Running the tests in ‘tests/lgmRaster.R’ failed.
Complete output:
  > #+ setup
  > library('geostatsp')
  Loading required package: Matrix
  Loading required package: terra
  terra 1.8.54
  > #'
  > 
  > #' # simulated data
  > 
  > # exclude this line to use the RandomFields package
  > options(useRandomFields = FALSE)
  > 
  > Ncell =  40
  > 
  > myRaster = squareRaster(ext(0,6000,0,6000), Ncell)
  > 
  > myParam=c(oneminusar=0.1, conditionalVariance=2.5^2,shape=2)
  > myQ = maternGmrfPrec(myRaster, param=myParam)
  > attributes(myQ)$info$optimalShape
       shape   variance      range   cellSize 
    4.092496 110.524266 900.000000 150.000000 
  > set.seed(0)
  > mySim = RFsimulate(attributes(myQ)$info$optimalShape, myRaster)
  install the RandomFields package for faster simulations
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [476s/358s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 ERRORs