* installing *source* package ‘genepop’ ... ** this is package ‘genepop’ version ‘1.2.2’ ** package ‘genepop’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ using C++11 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/genepop/src' g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c CT_tests.cpp -o CT_tests.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c F_est.cpp -o F_est.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c GenepopS.cpp -o GenepopS.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c HW_tests.cpp -o HW_tests.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RGenepop.cpp -o RGenepop.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bootstrap.cpp -o bootstrap.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c conversions.cpp -o conversions.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c genepop.cpp -o genepop.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c multimig.cpp -o multimig.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c proba.cpp -o proba.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c settings.cpp -o settings.o g++ -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -DCOMPATIBILITYRCPP -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c tools.cpp -o tools.o g++ -std=gnu++11 -shared -L/usr/local/lib64 -o genepop.so CT_tests.o F_est.o GenepopS.o HW_tests.o RGenepop.o RcppExports.o bootstrap.o conversions.o genepop.o multimig.o proba.o settings.o tools.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/genepop/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/genepop/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/genepop/src' installing to /data/gannet/ripley/R/packages/tests-devel/genepop.Rcheck/00LOCK-genepop/00new/genepop/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (genepop)