• using R Under development (unstable) (2025-12-28 r89254)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘gamboostLSS/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘gamboostLSS’ version ‘2.1-0’
• checking package namespace information ... OK
• checking package dependencies ... INFO Package suggested but not available for checking: ‘R2BayesX’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘gamboostLSS’ can be installed ... [18s/53s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... [4s/11s] OK
• checking whether the package can be unloaded cleanly ... [4s/14s] OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... [4s/11s] OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [32s/87s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [15s/41s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5m/11m] OK   Running ‘bugfixes.R’ [8s/28s]   Running ‘regtest-families.R’ [193s/390s]   Running ‘regtest-gamboostLSS.R’ [10s/29s]   Running ‘regtest-glmboostLSS.R’ [10s/27s]   Running ‘regtest-mstop.R’ [6s/18s]   Running ‘regtest-noncyclic_fitting.R’ [15s/39s]   Running ‘regtest-stabilization.R’ [48s/122s]   Running ‘regtest-stabsel.R’ [14s/24s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [24s/61s] ERROR Error(s) in re-building vignettes: --- re-building ‘gamboostLSS_Tutorial.Rnw’ using Sweave Loading required package: R2BayesX Installing package into '/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck' (as 'lib' is unspecified) also installing the dependency 'BayesXsrc' trying URL 'http://cran.at.r-project.org/src/contrib/BayesXsrc_3.0-6.tar.gz' trying URL 'http://cran.at.r-project.org/src/contrib/R2BayesX_1.1-6.tar.gz' Warning: SystemRequirements specified C++14: support has been removed * installing *source* package ‘BayesXsrc’ ... ** this is package ‘BayesXsrc’ version ‘3.0-6’ ** package ‘BayesXsrc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/tmp/RtmpDSuDBY/working_dir/RtmpmH1o1S/R.INSTALL3fd9974d6f285a/BayesXsrc/src' `"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14` `"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14STD` -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -Ibayesxsrc/. -I"bayesxsrc/bib" -I"bayesxsrc/alex" -I"bayesxsrc/adaptiv" -I"bayesxsrc/andrea" -I"bayesxsrc/dag" -I"bayesxsrc/graph" -I"bayesxsrc/mcmc" -I"bayesxsrc/psplines" -I"bayesxsrc/samson" -I"bayesxsrc/leyre" -I"bayesxsrc/structadd" `gsl-config --cflags` -D__BUILDING_GNU -D__BUILDING_LINUX -DTEMPL_INCL_DEF -D_MSC_VER2 -DNO_TEMPLATE_FRIENDS -DINCLUDE_REML -DINCLUDE_MCMC -DBUILD_FOR_BAYESXSRC -fpic `"/data/gannet/ripley/R/R-devel/bin/R" CMD config CXX14FLAGS` -c bayesxsrc/andrea/baseline.cpp -o bayesxsrc/andrea/baseline.o 'config' variable 'CXX14' is defunct 'config' variable 'CXX14STD' is defunct 'config' variable 'CXX14FLAGS' is defunct /bin/sh: line 1: -I/data/gannet/ripley/R/R-devel/include: No such file or directory make[1]: *** [/data/gannet/ripley/R/R-devel/etc/Makeconf:201: bayesxsrc/andrea/baseline.o] Error 127 make[1]: Leaving directory '/tmp/RtmpDSuDBY/working_dir/RtmpmH1o1S/R.INSTALL3fd9974d6f285a/BayesXsrc/src' ERROR: compilation failed for package ‘BayesXsrc’ * removing ‘/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck/BayesXsrc’ ERROR: dependency ‘BayesXsrc’ is not available for package ‘R2BayesX’ Perhaps try a variation of: install.packages('BayesXsrc') * removing ‘/data/gannet/ripley/R/packages/tests-devel/gamboostLSS.Rcheck/R2BayesX’ The downloaded source packages are in  '/tmp/RtmpDSuDBY/working_dir/Rtmp1UIF3L/downloaded_packages' Loading required package: gamboostLSS Loading required package: mboost Loading required package: parallel Loading required package: stabs Attaching package: 'gamboostLSS' The following object is masked from 'package:stats':     model.weights Error: processing vignette 'gamboostLSS_Tutorial.Rnw' failed with diagnostics:  chunk 11 (label = india_stunting1) Error in library("R2BayesX") : there is no package called 'R2BayesX' --- failed re-building 'gamboostLSS_Tutorial.Rnw' SUMMARY: processing the following file failed:   'gamboostLSS_Tutorial.Rnw' Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [8s/24s] OK
• checking HTML version of manual ... [6s/16s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR