* installing *source* package ‘fastSOM’ ...
** package ‘fastSOM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/fastSOM/src'
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c Helpers.c -o Helpers.o
Helpers.c:69:68: warning: duplicate 'const' declaration specifier [-Wduplicate-decl-specifier]
   69 | void chol_part_C(const double * const s, int n, int col, const int const * perm, double * res)
      |                                                                    ^~~~~
Helpers.c: In function 'solve_sym':
Helpers.c:27:19: warning: '*tmpL' may be used uninitialized [-Wmaybe-uninitialized]
   27 |         tmpL[0] = sqrt(tmpL[0]);
      |                   ^~~~~~~~~~~~~
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c SOM.c -o SOM.o
SOM.c:7:68: warning: duplicate 'const' declaration specifier [-Wduplicate-decl-specifier]
    7 | void chol_part_C(const double * const s, int n, int col, const int const * perm, double * res);
      |                                                                    ^~~~~
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c fastSOM.c -o fastSOM.o
gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o fastSOM.so Helpers.o SOM.o fastSOM.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/fastSOM/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/fastSOM/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/fastSOM/src'
installing to /data/gannet/ripley/R/packages/tests-devel/fastSOM.Rcheck/00LOCK-fastSOM/00new/fastSOM/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fastSOM)