* installing *source* package ‘fasano.franceschini.test’ ...
** package ‘fasano.franceschini.test’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.1.0’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/fasano.franceschini.test/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ProgressBar.cpp -o ProgressBar.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppParallel/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c ff_internal_functions.cpp -o ff_internal_functions.o
In file included from ff_internal_functions.cpp:10:
distance.h: In function 'long int rangeDistance(const RTree&, const RTree&, std::size_t, std::size_t, const std::vector<double>&)':
distance.h:64:31: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
64 | for (std::size_t i = 0; i < (1 << ndim); ++i) {
| ~~^~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/tbb.h:32,
from /data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel/TBB.h:10,
from /data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel.h:24,
from ff_internal_functions.cpp:2:
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/atomic.h: In instantiation of 'tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = long unsigned int]':
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here
251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id);
| ~~~~~~~~~^~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/atomic.h:544:12: warning: casting 'long unsigned int' to 'tbb::atomic<long unsigned int>&' does not use 'constexpr tbb::atomic<long unsigned int>::atomic(long unsigned int)' [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/atomic.h: In instantiation of 'tbb::atomic<T>& tbb::internal::as_atomic(T&) [with T = tbb::interface5::internal::hash_map_base::bucket*]':
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/concurrent_hash_map.h:291:31: required from here
291 | && as_atomic(my_table[new_seg]).compare_and_swap(is_allocating, NULL) == NULL )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppParallel/include/tbb/atomic.h:544:12: warning: casting 'tbb::interface5::internal::hash_map_base::bucket*' to 'tbb::atomic<tbb::interface5::internal::hash_map_base::bucket*>&' does not use 'constexpr tbb::atomic<T*>::atomic(T*) [with T = tbb::interface5::internal::hash_map_base::bucket]' [-Wcast-user-defined]
544 | return (atomic<T>&)t;
| ^~~~~~~~~~~~~
In file included from ff_internal_functions.cpp:8:
RangeTree.h: In instantiation of 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]':
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:1158:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1158 | for (int i = 0; i < lower.size(); i++) {
| ~~^~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'std::vector<T> RangeTree::RangeTree<T, S>::getModifiedLower(const std::vector<T>&, const std::vector<bool>&) const [with T = double; S = int]':
RangeTree.h:1164:39: required from 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]'
1164 | return root->countInRange(getModifiedLower(lower, withLower),
| ^~~~~~~~~~~~~~~~
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:1085:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1085 | for (int i = 0; i < lower.size(); i++) {
| ~~^~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'std::vector<T> RangeTree::RangeTree<T, S>::getModifiedUpper(const std::vector<T>&, const std::vector<bool>&) const [with T = double; S = int]':
RangeTree.h:1165:39: required from 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]'
1165 | getModifiedUpper(upper, withUpper));
| ^~~~~~~~~~~~~~~~
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:1102:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1102 | for (int i = 0; i < upper.size(); i++) {
| ~~^~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'int RangeTree::RangeTreeNode<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&) const [with T = double; S = int]':
RangeTree.h:1164:38: required from 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]'
1164 | return root->countInRange(getModifiedLower(lower, withLower),
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1165 | getModifiedUpper(upper, withUpper));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:741:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::RangeTreeNode<double, int>*, std::allocator<RangeTree::RangeTreeNode<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
741 | for (int i = 0; i < nodes.size(); i++) {
| ~~^~~~~~~~~~~~~~
RangeTree.h:766:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::shared_ptr<RangeTree::RangeTreeNode<double, int> >, std::allocator<std::shared_ptr<RangeTree::RangeTreeNode<double, int> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
766 | for (int i = 0; i < canonicalNodes.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
RangeTree.h:772:47: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
772 | } else if (compareInd + 1 == point->dim()) {
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel/TinyThread.h:7,
from /data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel.h:6:
/data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel/Common.h: In instantiation of 'int RcppParallel::resolveValue(const char*, T, U) [with T = long unsigned int; U = int]':
/data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel.h:60:28: required from 'void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = PermutationTest; std::size_t = long unsigned int]'
60 | grainSize = resolveValue("RCPP_PARALLEL_GRAIN_SIZE", grainSize, 1);
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ff_internal_functions.cpp:366:19: required from here
366 | parallelReduce(0, nPermute, pt);
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
16 | if (requestedValue != defaultValue && requestedValue > 0)
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'bool RangeTree::RangeTreeNode<T, S>::pointInRange(const RangeTree::Point<T, S>&, const std::vector<T>&, const std::vector<T>&) const [with T = double; S = int]':
RangeTree.h:704:21: required from 'int RangeTree::RangeTreeNode<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&) const [with T = double; S = int]'
704 | if (pointInRange(*point, lower, upper)) {
| ^~~~~~~~~~~~
RangeTree.h:1164:38: required from 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]'
1164 | return root->countInRange(getModifiedLower(lower, withLower),
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1165 | getModifiedUpper(upper, withUpper));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:683:31: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
683 | for (int i = 0; i < point.dim(); i++) {
| ~~^~~~~~~~~~~~~
RangeTree.h: In instantiation of 'T RangeTree::Point<T, S>::operator[](int) const [with T = double; S = int]':
RangeTree.h:712:25: required from 'int RangeTree::RangeTreeNode<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&) const [with T = double; S = int]'
712 | if ((*point)[compareInd] > upper[compareInd]) {
| ~~~~~~~~^
RangeTree.h:1164:38: required from 'int RangeTree::RangeTree<T, S>::countInRange(const std::vector<T>&, const std::vector<T>&, const std::vector<bool>&, const std::vector<bool>&) const [with T = double; S = int]'
1164 | return root->countInRange(getModifiedLower(lower, withLower),
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1165 | getModifiedUpper(upper, withUpper));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:82:63: required from here
82 | long res1 = static_cast<long>(n2 * rtree1.countInRange(lowerLims, upperLims,
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
83 | strict, strict));
| ~~~~~~~~~~~~~~~
RangeTree.h:157:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
157 | if(index < 0 || index >= dim()) {
| ~~~~~~^~~~~~~~
RangeTree.h: In instantiation of 'std::vector<std::shared_ptr<RangeTree::Point<T, S> > > RangeTree::RangeTree<T, S>::copyPointsToHeap(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]':
RangeTree.h:1126:72: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1126 | RangeTree(const std::vector<Point<T,S> >& points): savedPoints(copyPointsToHeap(points)),
| ^~~~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:1068:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1068 | for (int i = 0; i < points.size(); i++) {
| ~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'std::vector<RangeTree::Point<T, S>*> RangeTree::RangeTree<T, S>::getRawPointers(std::vector<std::shared_ptr<RangeTree::Point<T, S> > >&) [with T = double; S = int]':
RangeTree.h:1127:75: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1127 | savedPointsRaw(getRawPointers(savedPoints)) {
| ^~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:1076:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::shared_ptr<RangeTree::Point<double, int> >, std::allocator<std::shared_ptr<RangeTree::Point<double, int> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1076 | for (int i = 0; i < points.size(); i++) {
| ~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'RangeTree::SortedPointMatrix<T, S>::SortedPointMatrix(std::vector<RangeTree::Point<T, S>*>&) [with T = double; S = int]':
RangeTree.h:1128:36: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1128 | SortedPointMatrix<T,S> spm(savedPointsRaw);
| ^~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:344:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
344 | for (int i = 1; i < points.size(); i++) {
| ~~^~~~~~~~~~~~~~~
RangeTree.h:345:42: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
345 | if (points[i]->dim() != dim) {
| ~~~~~~~~~~~~~~~~~^~~~~~
RangeTree.h:360:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
360 | for (int i = 1; i < points.size(); i++) {
| ~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'RangeTree::RangeTreeNode<T, S>::RangeTreeNode(RangeTree::SortedPointMatrix<T, S>&, bool, bool) [with T = double; S = int]':
RangeTree.h:1129:57: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1129 | root = std::shared_ptr<RangeTreeNode<T,S> >(new RangeTreeNode<T,S>(spm));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:529:41: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
529 | if (spm.getCurrentDim() == point->dim() - 2) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
RangeTree.h:546:39: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
546 | for (int i = 0; i < allPointsSorted.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~
RangeTree.h:557:84: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
557 | } else if (!onLeftEdge && !onRightEdge && spm.getCurrentDim() + 1 != point->dim()) {
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'bool RangeTree::PointOrdering<T, S>::less(const RangeTree::Point<T, S>&, const RangeTree::Point<T, S>&) const [with T = double; S = int]':
RangeTree.h:355:56: required from 'RangeTree::SortedPointMatrix<T, S>::SortedPointMatrix(std::vector<RangeTree::Point<T, S>*>&) [with T = double; S = int]'
355 | return pointOrdering.less(*p1, *p2);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~
RangeTree.h:1128:36: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1128 | SortedPointMatrix<T,S> spm(savedPointsRaw);
| ^~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:253:35: warning: comparison of integer expressions of different signedness: 'const int' and 'long unsigned int' [-Wsign-compare]
253 | if (compareStartIndex >= p1.dim()) {
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
RangeTree.h:256:47: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
256 | for (int i = compareStartIndex; i < p1.dim(); i++) {
| ~~^~~~~~~~~~
RangeTree.h: In instantiation of 'std::vector<int> RangeTree::SortedPointMatrix<T, S>::sortOrder(const std::vector<RangeTree::Point<T, S>*>&, int) [with T = double; S = int]':
RangeTree.h:374:50: required from 'RangeTree::SortedPointMatrix<T, S>::SortedPointMatrix(std::vector<RangeTree::Point<T, S>*>&) [with T = double; S = int]'
374 | std::vector<int> order = sortOrder(pointsSortedByCurrentDim, i);
| ^~~~~~~~~
RangeTree.h:1128:36: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1128 | SortedPointMatrix<T,S> spm(savedPointsRaw);
| ^~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:305:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
305 | for (int i = 0; i < points.size(); i++) { order[i] = i; }
| ~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'void RangeTree::SortedPointMatrix<T, S>::rearrangeGivenOrder(std::vector<RangeTree::Point<T, S>*>&, const std::vector<int>&) [with T = double; S = int]':
RangeTree.h:376:25: required from 'RangeTree::SortedPointMatrix<T, S>::SortedPointMatrix(std::vector<RangeTree::Point<T, S>*>&) [with T = double; S = int]'
376 | rearrangeGivenOrder(pointsSortedByCurrentDim, order);
| ^~~~~~~~~~~~~~~~~~~
RangeTree.h:1128:36: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1128 | SortedPointMatrix<T,S> spm(savedPointsRaw);
| ^~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:325:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
325 | for (int i = 0; i < points.size(); i++) {
| ~~^~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'void RangeTree::SortedPointMatrix<T, S>::moveToNextDimension() [with T = double; S = int]':
RangeTree.h:530:44: required from 'RangeTree::RangeTreeNode<T, S>::RangeTreeNode(RangeTree::SortedPointMatrix<T, S>&, bool, bool) [with T = double; S = int]'
530 | spm.moveToNextDimension();
| ~~~~~~~~~~~~~~~~~~~~~~~^~
RangeTree.h:1129:57: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1129 | root = std::shared_ptr<RangeTreeNode<T,S> >(new RangeTreeNode<T,S>(spm));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:389:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RangeTree::Point<double, int>*, std::allocator<RangeTree::Point<double, int>*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
389 | for (int i = 0; i < pointsSortedByCurrentDim.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'std::pair<RangeTree::SortedPointMatrix<T, S>, RangeTree::SortedPointMatrix<T, S> > RangeTree::SortedPointMatrix<T, S>::splitOnMid() [with T = double; S = int]':
RangeTree.h:533:46: required from 'RangeTree::RangeTreeNode<T, S>::RangeTreeNode(RangeTree::SortedPointMatrix<T, S>&, bool, bool) [with T = double; S = int]'
533 | auto spmPair = spm.splitOnMid();
| ~~~~~~~~~~~~~~^~
RangeTree.h:1129:57: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1129 | root = std::shared_ptr<RangeTreeNode<T,S> >(new RangeTreeNode<T,S>(spm));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:448:35: warning: comparison of integer expressions of different signedness: 'int' and 'std::deque<std::vector<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
448 | for (int i = 0; i < redirectionTable.size(); i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~
RangeTree.h: In instantiation of 'std::vector<int> RangeTree::RangeTreeNode<T, S>::createGeqPointers(const std::vector<T>&, const std::vector<T>&) [with T = double; S = int]':
RangeTree.h:553:40: required from 'RangeTree::RangeTreeNode<T, S>::RangeTreeNode(RangeTree::SortedPointMatrix<T, S>&, bool, bool) [with T = double; S = int]'
553 | pointerToGeqLeft = createGeqPointers(pointsLastDimSorted, leftSorted);
| ^~~~~~~~~~~~~~~~~
RangeTree.h:1129:57: required from 'RangeTree::RangeTree<T, S>::RangeTree(const std::vector<RangeTree::Point<T, S> >&) [with T = double; S = int]'
1129 | root = std::shared_ptr<RangeTreeNode<T,S> >(new RangeTreeNode<T,S>(spm));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
distance.h:43:13: required from 'std::vector<RangeTree::RangeTree<double, int> > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
43 | return {RTree(pts1), RTree(pts2)};
| ^~~~~~~~~~~
ff_internal_functions.cpp:89:60: required from 'long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector<long unsigned int>&, char) [with MatrixT = RcppParallel::RMatrix<double>; std::size_t = long unsigned int]'
89 | std::vector<RTree> trees = buildRangeTrees<MatrixT>(M, n1, n2, s);
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
ff_internal_functions.cpp:331:67: required from here
331 | long z = testStatistic<RcppParallel::RMatrix<double> >(S, r1, r2, shuffle,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
332 | method);
| ~~~~~~~
RangeTree.h:569:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
569 | for (int i = 0; i < vec.size(); i++) {
| ~~^~~~~~~~~~~~
RangeTree.h:570:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
570 | while (k < subVec.size() && subVec[k] < vec[i]) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o fasano.franceschini.test.so ProgressBar.o RcppExports.o ff_internal_functions.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/fasano.franceschini.test/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/fasano.franceschini.test/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/fasano.franceschini.test/src'
installing to /data/gannet/ripley/R/packages/tests-devel/fasano.franceschini.test.Rcheck/00LOCK-fasano.franceschini.test/00new/fasano.franceschini.test/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fasano.franceschini.test)