* installing *source* package ‘dynaTree’ ... ** this is package ‘dynaTree’ version ‘1.2-17’ ** package ‘dynaTree’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/dynaTree/src' g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c cloud.cc -o cloud.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c dynaTree.cc -o dynaTree.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c lh.c -o lh.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c linalg.c -o linalg.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c matrix.c -o matrix.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c pall.c -o pall.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c particle.cc -o particle.o gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c rhelp.c -o rhelp.o g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/usr/local/include -DRPRINT -DNDEBUG -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -c tree.cc -o tree.o g++ -std=gnu++17 -shared -L/usr/local/lib64 -o dynaTree.so cloud.o dynaTree.o init.o lh.o linalg.o matrix.o pall.o particle.o rhelp.o tree.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/dynaTree/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/dynaTree/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/dynaTree/src' installing to /data/gannet/ripley/R/packages/tests-devel/dynaTree.Rcheck/00LOCK-dynaTree/00new/dynaTree/libs ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dynaTree)