* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/datawizard.Rcheck’
* using R Under development (unstable) (2025-02-25 r87816)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘datawizard/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘datawizard’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘datawizard’ can be installed ... [17s/17s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/datawizard-00install.html' for details.
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [36s/37s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [25s/26s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [809s/420s] ERROR
  Running ‘testthat.R’ [808s/419s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(datawizard)
  > 
  > test_check("datawizard")
  Starting 2 test processes
  [ FAIL 2 | WARN 2 | SKIP 81 | PASS 1865 ]
  
  ══ Skipped tests (81) ══════════════════════════════════════════════════════════
  • On CRAN (80): 'test-categorize.R:239:3', 'test-categorize.R:246:3',
    'test-contr.deviation.R:21:3', 'test-data_codebook.R:5:3',
    'test-data_codebook.R:10:3', 'test-data_codebook.R:18:3',
    'test-data_codebook.R:31:3', 'test-data_codebook.R:36:3',
    'test-data_codebook.R:41:3', 'test-data_codebook.R:49:3',
    'test-data_codebook.R:57:3', 'test-data_codebook.R:70:3',
    'test-data_codebook.R:81:3', 'test-data_codebook.R:91:3',
    'test-data_codebook.R:103:3', 'test-data_codebook.R:121:3',
    'test-data_codebook.R:138:3', 'test-data_codebook.R:147:3',
    'test-data_codebook.R:156:3', 'test-data_codebook.R:177:3',
    'test-data_codebook.R:208:3', 'test-data_partition.R:11:3',
    'test-data_peek.R:32:3', 'test-data_read.R:8:1', 'test-data_modify.R:389:3',
    'test-data_modify.R:398:3', 'test-data_rescale.R:34:3',
    'test-data_seek.R:80:3', 'test-data_separate.R:172:3',
    'test-data_separate.R:236:3', 'test-data_separate.R:321:3',
    'test-data_separate.R:333:3', 'test-data_summary.R:170:3',
    'test-data_summary.R:177:3', 'test-data_to_factor.R:87:1',
    'test-data_tabulate.R:64:3', 'test-data_tabulate.R:157:3',
    'test-data_tabulate.R:163:3', 'test-data_tabulate.R:170:3',
    'test-data_tabulate.R:177:3', 'test-data_tabulate.R:234:3',
    'test-data_tabulate.R:240:3', 'test-data_tabulate.R:248:3',
    'test-data_tabulate.R:306:3', 'test-data_tabulate.R:342:3',
    'test-data_tabulate.R:382:3', 'test-data_tabulate.R:414:3',
    'test-data_to_long.R:72:3', 'test-data_to_long.R:496:3',
    'test-data_to_numeric.R:2:3', 'test-data_to_numeric.R:44:3',
    'test-data_to_numeric.R:175:3', 'test-data_write.R:5:1',
    'test-demean.R:12:3', 'test-demean.R:66:3', 'test-empty-dataframe.R:16:3',
    'test-describe_distribution.R:95:3', 'test-describe_distribution.R:104:3',
    'test-describe_distribution.R:281:3', 'test-means_by_group.R:4:3',
    'test-means_by_group.R:19:3', 'test-print.dw_transformer.R:3:3',
    'test-ranktransform.R:67:3', 'test-normalize.R:30:3',
    'test-rescale_weights.R:6:3', 'test-rescale_weights.R:31:3',
    'test-rescale_weights.R:41:3', 'test-reshape_ci.R:12:3',
    'test-reshape_ci.R:25:3', 'test-skewness-kurtosis.R:27:3',
    'test-skewness-kurtosis.R:37:3', 'test-skewness-kurtosis.R:48:3',
    'test-skewness-kurtosis.R:58:3', 'test-smoothness.R:28:3',
    'test-standardize_models.R:210:3', 'test-standardize_models.R:241:3',
    'test-standardize_models.R:320:3', 'test-text_format.R:2:3',
    'test-text_format.R:74:3', 'test-winsorization.R:8:3'
  • {bayestesR} is not installed (1): 'test-data_summary.R:234:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-adjust.R:4:3'): adjust multilevel ────────────────────────────
  head(adj$Sepal.Length) (`actual`) not equal to c(0.08698, -0.11302, -0.31302, -0.41302, -0.01302, 0.38698) (`expected`).
  
    `actual`: 0.0838 -0.1162 -0.3162 -0.4162 -0.0162 0.3838
  `expected`: 0.0870 -0.1130 -0.3130 -0.4130 -0.0130 0.3870
  ── Error ('test-data_rename.R:40:3'): data_rename: multiple selection types ────
  Error in `grep(pattern, x, ignore.case, value, perl, fixed, useBytes, invert)`: NA in coercion to Rboolean
  Backtrace:
      â–†
   1. ├─testthat::expect_named(...) at test-data_rename.R:40:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─datawizard::data_rename(...)
   5.   └─datawizard:::.select_nse(...)
   6.     └─datawizard:::.eval_expr(...)
   7.       └─datawizard:::.eval_call(...)
   8.         └─datawizard:::.select_helper(...)
   9.           └─base::grep(rgx, colnames(data), ignore.case = ignore_case)
  
  [ FAIL 2 | WARN 2 | SKIP 81 | PASS 1865 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [14s/14s] OK
* checking PDF version of manual ... [11s/11s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR