* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/dataquieR.Rcheck’ * using R Under development (unstable) (2025-02-24 r87814) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘dataquieR/DESCRIPTION’ ... OK * this is package ‘dataquieR’ version ‘2.5.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘dataquieR’ can be installed ... [130s/369s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/dataquieR-00install.html' for details. * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6m/15m] OK * checking Rd files ... [7s/17s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [4s/13s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [108s/162s] ERROR Running ‘testthat.R’ [108s/161s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # options("testthat.default_reporter" = testthat::RStudioReporter) > library(dataquieR) > testthat::test_check("dataquieR") Starting 2 test processes [ FAIL 2 | WARN 0 | SKIP 231 | PASS 20 ] â•â• Skipped tests (231) â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â• • On CRAN (231): 'test-dq_report_by_sm.R:7:3', 'test-dq_report2.R:2:3', 'test-dq_report_by_arguments.R:7:3', 'test-dq_report_by_s.R:3:3', 'test-int_encoding_errors.R:2:3', 'test-int_encoding_errors.R:80:3', 'test-dq_report_by_pipesymbol_list.R:3:3', 'test-dq_report_by_m.R:3:3', 'test-plots.R:2:3', 'test-plots.R:33:3', 'test-plots.R:102:3', 'test-plots.R:144:3', 'test-plots.R:167:3', 'test-plots.R:185:3', 'test-plots.R:210:3', 'test-plots.R:271:3', 'test-plots.R:301:3', 'test-plots.R:400:3', 'test-plots.R:453:3', 'test-plots.R:483:3', 'test-com_item_missingness.R:2:3', 'test-dq_report_by_na.R:3:3', 'test-dq_report_by_directories.R:3:3', 'test-acc_loess.R:2:3', 'test-acc_loess.R:273:3', 'test-acc_loess.R:438:3', 'test-acc_loess.R:521:3', 'test-acc_loess.R:565:3', 'test-acc_loess.R:681:3', 'test-acc_loess.R:886:3', 'test-acc_loess.R:949:3', 'test-acc_loess.R:993:3', 'test-acc_loess.R:1037:3', 'test-acc_loess.R:1083:3', 'test-acc_loess.R:1116:3', 'test-acc_loess.R:1149:3', 'test-acc_loess.R:1207:3', 'test-con_contradictions_redcap.R:2:3', 'test-con_contradictions_redcap.R:59:3', 'test-con_contradictions_redcap.R:108:3', 'test-con_contradictions_redcap.R:182:3', 'test-com_segment_missingness.R:2:3', 'test-com_segment_missingness.R:221:3', 'test-util_correct_variable_use.R:2:3', 'test-000_globs.R:3:3', 'test-acc_cat_distributions.R:2:3', 'test-con_limit_deviations.R:2:3', 'test-con_limit_deviations.R:47:3', 'test-con_limit_deviations.R:101:3', 'test-con_limit_deviations.R:160:3', 'test-con_limit_deviations.R:240:3', 'test-con_limit_deviations.R:288:3', 'test-con_limit_deviations.R:336:3', 'test-con_limit_deviations.R:384:3', 'test-con_limit_deviations.R:440:3', 'test-con_limit_deviations.R:531:3', 'test-con_limit_deviations.R:567:3', 'test-con_limit_deviations.R:602:3', 'test-con_limit_deviations.R:642:3', 'test-acc_distributions_ecdf.R:2:3', 'test-acc_distributions.R:2:3', 'test-acc_distributions.R:93:3', 'test-acc_distributions.R:114:3', 'test-acc_distributions.R:138:3', 'test-acc_margins.R:2:3', 'test-acc_margins.R:248:3', 'test-acc_end_digits.R:2:3', 'test-acc_end_digits.R:45:3', 'test-acc_end_digits.R:81:3', 'test-acc_end_digits.R:109:3', 'test-acc_multivariate_outlier.R:2:3', 'test-acc_multivariate_outlier.R:60:3', 'test-acc_multivariate_outlier.R:127:3', 'test-acc_shape_or_scale.R:2:3', 'test-acc_shape_or_scale.R:243:3', 'test-acc_univariate_outlier.R:2:3', 'test-acc_univariate_outlier.R:135:3', 'test-acc_varcomp.R:2:3', 'test-acc_varcomp.R:52:3', 'test-acc_varcomp.R:88:3', 'test-acc_varcomp.R:134:3', 'test-acc_varcomp.R:174:3', 'test-acc_varcomp2.R:2:3', 'test-com_qualified_item_missingness.R:2:3', 'test-com_unit_missingness.R:2:3', 'test-com_qualified_segment_missingness.R:2:3', 'test-com_qualified_segment_missingness.R:32:3', 'test-con_contradictions.R:2:3', 'test-con_inadmissible_categorical.R:2:3', 'test-dataquieR_resultset.R:2:3', 'test-des_summary.R:7:3', 'test-dataquieR_resultset2.R:2:3', 'test-dq_report_by_sb.R:7:3', 'test-dq_report_by_respvars.R:3:3', 'test-dq_report_by_storr.R:2:3', 'test-get_internal_api.R:2:3', 'test-function_arguments.R:2:3', 'test-function_arguments.R:61:3', 'test-function_arguments.R:88:3', 'test-int_datatype_matrix.R:2:3', 'test-int_unexp_elements.R:2:3', 'test-int_sts_element_dataframe.R:2:3', 'test-int_unexp_records.R:2:3', 'test-int_unexp_records_set.R:2:3', 'test-meta_data_env.R:2:3', 'test-prep_acc_distributions_with_ecdf.R:2:3', 'test-nres.R:2:3', 'test-prep_add_to_meta.R:2:3', 'test-prep_apply_coding.R:2:3', 'test-prep_check_meta_names.R:2:3', 'test-prep_clean_labels.R:2:3', 'test-prep_combine_report_summaries.R:2:3', 'test-prep_compare_meta_with_study.R:2:3', 'test-prep_create_meta.R:2:3', 'test-prep_create_meta_data_file.R:2:3', 'test-prep_datatype_from_data.R:2:3', 'test-prep_datatype_from_data.R:39:3', 'test-prep_dq_data_type_of.R:2:3', 'test-prep_get_data_frame.R:2:3', 'test-prep_get_study_data_segment.R:2:3', 'test-prep_load_folder_with_metadata.R:2:3', 'test-prep_map_labels.R:2:3', 'test-prep_min_obs_level.R:2:3', 'test-prep_pmap.R:2:3', 'test-prep_prepare_dataframes.R:2:3', 'test-prep_render_pie_charts.R:2:3', 'test-prep_save_report.R:2:3', 'test-prep_title_escape.R:2:3', 'test-prep_study2meta.R:2:3', 'test-prep_study2meta.R:57:3', 'test-prep_study2meta.R:132:3', 'test-prep_undisclose.R:2:3', 'test-prep_valuelabels_from_data.R:2:3', 'test-pro_applicability_matrix.R:2:3', 'test-print.R:2:3', 'test-print.R:14:3', 'test-print.R:170:3', 'test-print.R:213:3', 'test-rbind.R:2:3', 'test-reflection.R:2:3', 'test-util_acc_loess_bin.R:2:3', 'test-util_app_cd.R:2:3', 'test-util_app_dc.R:2:3', 'test-util_app_dl.R:2:3', 'test-util_app_ed.R:2:3', 'test-util_app_iac.R:2:3', 'test-util_app_hl.R:2:3', 'test-util_app_im.R:2:3', 'test-util_app_iav.R:2:3', 'test-util_app_loess.R:2:3', 'test-util_app_mar.R:2:3', 'test-util_app_mol.R:2:3', 'test-util_app_ol.R:2:3', 'test-util_app_sl.R:2:3', 'test-util_app_sm.R:2:3', 'test-util_app_vc.R:2:3', 'test-util_app_sos.R:2:3', 'test-util_as_numeric.R:2:3', 'test-util_assign_levlabs.R:2:3', 'test-util_backtickQuote.R:2:3', 'test-util_check_data_type.R:2:3', 'test-util_check_group_levels.R:2:3', 'test-util_check_one_unique_value.R:2:3', 'test-util_compare_meta_with_study.R:2:3', 'test-util_combine_missing_lists.R:2:3', 'test-util_detect_cores.R:2:3', 'test-util_dichotomize.R:2:3', 'test-util_dichotomize.R:49:3', 'test-util_dist_selection.R:2:3', 'test-util_ds1_eval_env.R:2:3', 'test-util_empty.R:2:3', 'test-util_contradiction_rules.R:32:3', 'test-util_contradiction_rules.R:41:3', 'test-util_contradiction_rules.R:72:3', 'test-util_contradiction_rules.R:107:3', 'test-util_contradiction_rules.R:142:3', 'test-util_contradiction_rules.R:189:3', 'test-util_contradiction_rules.R:204:3', 'test-util_contradiction_rules.R:223:3', 'test-util_contradiction_rules.R:235:3', 'test-util_contradiction_rules.R:247:3', 'test-util_ensure_character.R:2:3', 'test-util_ensure_suggested.R:2:3', 'test-util_error.R:2:3', 'test-util_finalize_sizing_hints.R:2:3', 'test-util_find_external_functions_in_stacktrace.R:2:3', 'test-util_find_external_functions_in_stacktrace.R:26:3', 'test-util_find_first_externally_called_functions_in_stacktrace.R:2:3', 'test-util_find_free_missing_code.R:2:3', 'test-util_has_no_group_vars.R:2:3', 'test-util_get_code_list.R:2:3', 'test-util_get_code_list.R:88:3', 'test-util_get_code_list.R:117:3', 'test-util_heatmap_1th.R:2:3', 'test-util_html_attr_quote_escape.R:2:3', 'test-util_is_valid_missing_codes.R:2:3', 'test-util_looks_like_missing.R:2:3', 'test-util_map_all.R:2:3', 'test-util_interpret_limits.R:2:3', 'test-util_map_by_largest_prefix.R:2:3', 'test-util_no_value_labels.R:2:3', 'test-util_map_labels.R:2:3', 'test-util_observations_in_subgroups.R:2:3', 'test-util_parallel_futures.R:4:3', 'test-util_par_pmap.R:2:3', 'test-util_parse_assignments.R:2:3', 'test-util_parse_assignments.R:18:3', 'test-util_parse_redcap_rule.R:2:3', 'test-util_plot_figure_no_plotly.R:2:3', 'test-util_plot_categorical_vars.R:2:3', 'test-util_plot_categorical_vars.R:55:3', 'test-util_plot_figure_plotly.R:2:3', 'test-util_queue_cluster.R:2:3', 'test-util_remove_empty_rows.R:2:3', 'test-util_remove_na_records.R:2:3', 'test-util_render_table_dataquieR_summary.R:7:3', 'test-util_replace_codes_by_na.R:2:3', 'test-util_set_doublequotes.R:2:3', 'test-util_set_singlequotes.R:2:3', 'test-util_set_size.R:2:3', 'test-util_split_val_tab.R:2:3', 'test-util_split_val_tab.R:68:3', 'test-util_startsWith_prefix._or_equals_prefix.R:2:3', 'test-util_standardise_ordinal_codes.R:2:3', 'test-util_unit2baseunit.R:2:3', 'test-util_user_hint.R:2:3', 'test-util_validate_known_meta.R:2:3', 'test-util_varcomp_robust.R:2:3', 'test-util_warn_unordered.R:3:3', 'test-util_warning.R:2:3', 'test-util_warning.R:48:3' â•â• Failed tests â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â•â• ── Error ('test-prep_add_missing_codes.R:8:4'): prep_add_missing_codes works ─── Error in `islistfactor(x, recursive)`: NA in coercion to Rboolean Backtrace: â–† 1. └─dataquieR::prep_add_missing_codes(...) at test-prep_add_missing_codes.R:8:4 2. └─dataquieR::prep_prepare_dataframes(...) 3. └─dataquieR:::util_validate_known_meta(meta_data) 4. ├─base::suppressMessages(...) 5. │ └─base::withCallingHandlers(...) 6. ├─base::suppressWarnings(...) 7. │ └─base::withCallingHandlers(...) 8. ├─base::withCallingHandlers(...) 9. └─dataquieR:::util_interpret_limits(mdata = meta_data) 10. ├─base::cbind.data.frame(...) 11. │ └─base::data.frame(..., check.names = FALSE) 12. ├─base::t(apply(as.data.frame(X[[lv[i]]]), 1, myfun1)) 13. └─base::apply(as.data.frame(X[[lv[i]]]), 1, myfun1) 14. └─dataquieR (local) FUN(newX[, i], ...) 15. ├─base::trimws(unlist(strsplit(as.character(x), split = ";"), "both")) 16. │ ├─base (local) mysub(...) 17. │ │ └─base::sub(re, "", x, perl = TRUE) 18. │ │ └─base::is.factor(x) 19. │ └─base (local) mysub(paste0("^", whitespace, "+"), x) 20. │ └─base::sub(re, "", x, perl = TRUE) 21. │ └─base::is.factor(x) 22. └─base::unlist(strsplit(as.character(x), split = ";"), "both") ── Error ('test-util_interpret_limits.R:45:3'): util_interpret_limits works ──── Error in `islistfactor(x, recursive)`: NA in coercion to Rboolean Backtrace: â–† 1. └─dataquieR:::util_interpret_limits(meta) at test-util_interpret_limits.R:45:3 2. ├─base::cbind.data.frame(...) 3. │ └─base::data.frame(..., check.names = FALSE) 4. ├─base::t(apply(as.data.frame(X[[lv[i]]]), 1, myfun1)) 5. └─base::apply(as.data.frame(X[[lv[i]]]), 1, myfun1) 6. └─dataquieR (local) FUN(newX[, i], ...) 7. ├─base::trimws(unlist(strsplit(as.character(x), split = ";"), "both")) 8. │ ├─base (local) mysub(...) 9. │ │ └─base::sub(re, "", x, perl = TRUE) 10. │ │ └─base::is.factor(x) 11. │ └─base (local) mysub(paste0("^", whitespace, "+"), x) 12. │ └─base::sub(re, "", x, perl = TRUE) 13. │ └─base::is.factor(x) 14. └─base::unlist(strsplit(as.character(x), split = ";"), "both") [ FAIL 2 | WARN 0 | SKIP 231 | PASS 20 ] Deleting unused snapshots: • R4.3/acc_cat_distributions/acc-cat-distributions-education-1.svg • R4.3/acc_distributions/empty-cat5.svg • R4.3/acc_distributions/few-float-values.svg • R4.3/acc_distributions/non-consecutive-codes-work.svg • R4.3/acc_end_digits/enddigits-plot-for-crp-0-ok.svg • R4.3/acc_loess/loess-combined-plot-for-crp-0-both-ok.svg • R4.3/acc_loess/loess-combined-plot-for-crp-0-combined-ok.svg • R4.3/acc_loess/loess-combined-plot-for-crp-0-ok.svg • R4.3/acc_loess/loess-combined-plot-for-crp-0-with-covars-ok.svg • R4.3/acc_loess/loess-facets-plot-for-crp-0-both-ok.svg • R4.3/acc_loess/loess-facets-plot-for-crp-0-facets-ok.svg • R4.3/acc_loess/loess-facets-plot-for-crp-0-ok.svg • R4.3/acc_loess/loess-facets-plot-for-crp-0-with-covars-ok.svg • R4.3/acc_loess/loess-plot-for-crp-0-auto1-ok.svg • R4.3/acc_loess/loess-plot-for-crp-0-auto2-ok.svg • R4.3/acc_margins/margins-plot-for-crp-0-ok.svg • R4.3/acc_multivariate_outlier/acc-mv-outliercrp0globheava0.svg • R4.3/acc_shape_or_scale/shape-or-scale-plot-for-crp-0-ok.svg • R4.3/com_item_missingness/item-missingness-no-labels.svg • R4.3/com_item_missingness/item-missingness-w-labels.svg • R4.3/com_segment_missingness/segment-missingness-plot-ok.svg • R4.3/com_segment_missingness/segment-missingness-plot-r1-ok.svg • R4.3/com_segment_missingness/segment-missingness-plot-r2-ok.svg • R4.3/com_segment_missingness/segment-missingness-plot-r3-ok.svg • R4.3/con_contradictions/one-cat-contradiction-plot-ok.svg • R4.3/con_contradictions/summary-contradiction-plot-ok.svg • R4.3/con_contradictions_redcap/one-cat-contradiction-plot-ok.svg • R4.3/con_contradictions_redcap/summary-contradiction-plot-ok.svg • R4.3/con_limit_deviations/con-limit-deviations-4-hists-1-val.svg • R4.3/con_limit_deviations/con-limit-deviations-for-reverted.svg • R4.3/con_limit_deviations/con-limit-deviations-histgrms-misscds.svg • R4.3/con_limit_deviations/con-limit-deviations-nothing-within.svg • R4.3/con_limit_deviations/con-limit-deviations-reverse-w-1-0-max.svg • R4.3/int_datatype_matrix/intdtpart-interview.svg • R4.3/int_datatype_matrix/intdtpart-lab.svg • R4.3/int_datatype_matrix/intdtpart-phys-exam.svg • R4.3/int_datatype_matrix/intdtpart-questionnaire.svg • R4.3/int_datatype_matrix/intdtpart-study.svg • R4.3/int_datatype_matrix/integrity-datatype.svg • R4.3/plots/acc-distributions-def-edu0.svg • R4.3/plots/acc-distributions-gr-dbp0.svg • R4.3/plots/acc-multivariate-outlier-test-1.svg • R4.3/plots/acc-univariate-outlier-r-dbp-0.svg • R4.3/plots/con-contradictions-all-checks.svg • R4.3/plots/con-contradictions-by-tag.svg • R4.3/plots/con-contradictions-logical-age-checks-only.svg • R4.3/plots/con-contradictions-rc-all-checks.svg • R4.3/plots/con-contradictions-rc-by-tag.svg • R4.3/plots/con-contradictions-rc-logical-checks-only.svg • R4.3/plots/con-limit-deviations-all-item.svg • R4.3/plots/con-limit-deviations-all-quest-dt.svg • R4.3/plots/con-limit-deviations-all-sbp-0.svg • R4.3/plots/con-limit-deviations-low-item.svg • R4.3/plots/con-limit-deviations-low-quest-dt.svg • R4.3/plots/con-limit-deviations-low-sbp-0.svg • R4.3/plots/con-limit-deviations-upp-item.svg • R4.3/plots/con-limit-deviations-upp-quest-dt.svg • R4.3/plots/con-limit-deviations-upp-sbp-0.svg • R4.3/plots/empty-reportsummarytable.svg • R4.3/plots/heatmap-with-1-cat-var.svg • R4.3/plots/heatmap-with-2-cat-vars-but-w-o-strata-vars.svg • R4.3/plots/heatmap-with-2-cat-vars-but-w-strata-vars.svg • R4.3/plots/int-datatype-matrix-reportsummarytable.svg • R4.3/plots/int-datatype-matrix-segment-v50000.svg • R4.3/plots/int-datatype-matrix.svg • R4.3/plots/loess-def-dbp0.svg • R4.3/plots/loess-def-edu0.svg • R4.3/plots/loess-fac-dbp0.svg • R4.3/plots/loess-fac-edu0.svg • R4.3/plots/margins-dbp0.svg • R4.3/plots/margins-edu0.svg • R4.3/plots/pro-applicability-matrix-reportsummarytable.svg • R4.3/plots/pro-applicability-matrix-segment-v50000.svg • R4.3/plots/pro-applicability-matrix.svg • R4.3/plots/reportsummarytable-cont.svg • R4.3/plots/shape-or-scale-dbp0.svg • R4.3/prep_render_pie_charts/acc-varcomp-observer.svg • R4.3/prep_render_pie_charts/com-item-missingness.svg • R4.3/print/app-ex-repsumtab.svg • R4.3/print/im-empty-repsumtab.svg • R4.3/print/im-ex1-repsumtab.svg • R4.3/print/im-ex2-repsumtab.svg • R4.3/pro_applicability_matrix/appmatrix-plot-ok.svg • R4.3/pro_applicability_matrix/appmatrix-segment-v10000.svg • R4.3/util_heatmap_1th/util-heatmap-1th-1.svg • R4.3/util_heatmap_1th/util-heatmap-1th-2.svg • R4.3/util_heatmap_1th/util-heatmap-1th-3.svg • R4.4/acc_cat_distributions/acc-cat-distributions-education-1.svg • R4.4/acc_distributions/empty-cat5.svg • R4.4/acc_distributions/few-float-values.svg • R4.4/acc_distributions/non-consecutive-codes-work.svg • R4.4/acc_end_digits/enddigits-plot-for-crp-0-ok.svg • R4.4/acc_loess/loess-combined-plot-for-crp-0-both-ok.svg • R4.4/acc_loess/loess-combined-plot-for-crp-0-combined-ok.svg • R4.4/acc_loess/loess-combined-plot-for-crp-0-ok.svg • R4.4/acc_loess/loess-combined-plot-for-crp-0-with-covars-ok.svg • R4.4/acc_loess/loess-facets-plot-for-crp-0-both-ok.svg • R4.4/acc_loess/loess-facets-plot-for-crp-0-facets-ok.svg • R4.4/acc_loess/loess-facets-plot-for-crp-0-ok.svg • R4.4/acc_loess/loess-facets-plot-for-crp-0-with-covars-ok.svg • R4.4/acc_loess/loess-plot-for-crp-0-auto1-ok.svg • R4.4/acc_loess/loess-plot-for-crp-0-auto2-ok.svg • R4.4/acc_margins/margins-plot-for-crp-0-ok.svg • R4.4/acc_multivariate_outlier/acc-mv-outliercrp0globheava0.svg • R4.4/acc_shape_or_scale/shape-or-scale-plot-for-crp-0-ok.svg • R4.4/com_item_missingness/item-missingness-no-labels.svg • R4.4/com_item_missingness/item-missingness-w-labels.svg • R4.4/com_segment_missingness/segment-missingness-plot-ok.svg • R4.4/com_segment_missingness/segment-missingness-plot-r1-ok.svg • R4.4/com_segment_missingness/segment-missingness-plot-r2-ok.svg • R4.4/com_segment_missingness/segment-missingness-plot-r3-ok.svg • R4.4/con_contradictions/one-cat-contradiction-plot-ok.svg • R4.4/con_contradictions/summary-contradiction-plot-ok.svg • R4.4/con_contradictions_redcap/one-cat-contradiction-plot-ok.svg • R4.4/con_contradictions_redcap/summary-contradiction-plot-ok.svg • R4.4/con_limit_deviations/con-limit-deviations-4-hists-1-val.svg • R4.4/con_limit_deviations/con-limit-deviations-for-reverted.svg • R4.4/con_limit_deviations/con-limit-deviations-histgrms-misscds.svg • R4.4/con_limit_deviations/con-limit-deviations-nothing-within.svg • R4.4/con_limit_deviations/con-limit-deviations-quest-dt-0.svg • R4.4/con_limit_deviations/con-limit-deviations-reverse-w-1-0-max.svg • R4.4/int_datatype_matrix/intdtpart-interview.svg • R4.4/int_datatype_matrix/intdtpart-lab.svg • R4.4/int_datatype_matrix/intdtpart-phys-exam.svg • R4.4/int_datatype_matrix/intdtpart-questionnaire.svg • R4.4/int_datatype_matrix/intdtpart-study.svg • R4.4/int_datatype_matrix/integrity-datatype.svg • R4.4/plots/acc-distributions-def-edu0.svg • R4.4/plots/acc-distributions-gr-dbp0.svg • R4.4/plots/acc-multivariate-outlier-test-1.svg • R4.4/plots/acc-univariate-outlier-r-dbp-0.svg • R4.4/plots/con-contradictions-all-checks.svg • R4.4/plots/con-contradictions-by-tag.svg • R4.4/plots/con-contradictions-logical-age-checks-only.svg • R4.4/plots/con-contradictions-rc-all-checks.svg • R4.4/plots/con-contradictions-rc-by-tag.svg • R4.4/plots/con-contradictions-rc-logical-checks-only.svg • R4.4/plots/con-limit-deviations-all-item.svg • R4.4/plots/con-limit-deviations-all-quest-dt.svg • R4.4/plots/con-limit-deviations-all-sbp-0.svg • R4.4/plots/con-limit-deviations-low-item.svg • R4.4/plots/con-limit-deviations-low-quest-dt.svg • R4.4/plots/con-limit-deviations-low-sbp-0.svg • R4.4/plots/con-limit-deviations-upp-item.svg • R4.4/plots/con-limit-deviations-upp-quest-dt.svg • R4.4/plots/con-limit-deviations-upp-sbp-0.svg • R4.4/plots/empty-reportsummarytable.svg • R4.4/plots/heatmap-with-1-cat-var.svg • R4.4/plots/heatmap-with-2-cat-vars-but-w-o-strata-vars.svg • R4.4/plots/heatmap-with-2-cat-vars-but-w-strata-vars.svg • R4.4/plots/int-datatype-matrix-reportsummarytable.svg • R4.4/plots/int-datatype-matrix-segment-v50000.svg • R4.4/plots/int-datatype-matrix.svg • R4.4/plots/loess-def-dbp0.svg • R4.4/plots/loess-def-edu0.svg • R4.4/plots/loess-fac-dbp0.svg • R4.4/plots/loess-fac-edu0.svg • R4.4/plots/margins-dbp0.svg • R4.4/plots/margins-edu0.svg • R4.4/plots/pro-applicability-matrix-reportsummarytable.svg • R4.4/plots/pro-applicability-matrix-segment-v50000.svg • R4.4/plots/pro-applicability-matrix.svg • R4.4/plots/reportsummarytable-cont.svg • R4.4/plots/shape-or-scale-dbp0.svg • R4.4/prep_render_pie_charts/acc-varcomp-observer.svg • R4.4/prep_render_pie_charts/com-item-missingness.svg • R4.4/print/app-ex-repsumtab.svg • R4.4/print/im-empty-repsumtab.svg • R4.4/print/im-ex1-repsumtab.svg • R4.4/print/im-ex2-repsumtab.svg • R4.4/pro_applicability_matrix/appmatrix-plot-ok.svg • R4.4/pro_applicability_matrix/appmatrix-segment-v10000.svg • R4.4/util_heatmap_1th/util-heatmap-1th-1.svg • R4.4/util_heatmap_1th/util-heatmap-1th-2.svg • R4.4/util_heatmap_1th/util-heatmap-1th-3.svg • R4.5/acc_cat_distributions/acc-cat-distributions-education-1.svg • R4.5/acc_distributions/empty-cat5.svg • R4.5/acc_distributions/few-float-values.svg • R4.5/acc_distributions/non-consecutive-codes-work.svg • R4.5/acc_end_digits/enddigits-plot-for-crp-0-ok.svg • R4.5/acc_loess/loess-combined-plot-for-crp-0-both-ok.svg • R4.5/acc_loess/loess-combined-plot-for-crp-0-combined-ok.svg • R4.5/acc_loess/loess-combined-plot-for-crp-0-ok.svg • R4.5/acc_loess/loess-combined-plot-for-crp-0-with-covars-ok.svg • R4.5/acc_loess/loess-facets-plot-for-crp-0-both-ok.svg • R4.5/acc_loess/loess-facets-plot-for-crp-0-facets-ok.svg • R4.5/acc_loess/loess-facets-plot-for-crp-0-ok.svg • R4.5/acc_loess/loess-facets-plot-for-crp-0-with-covars-ok.svg • R4.5/acc_loess/loess-plot-for-crp-0-auto1-ok.svg • R4.5/acc_loess/loess-plot-for-crp-0-auto2-ok.svg • R4.5/acc_margins/margins-plot-for-crp-0-ok.svg • R4.5/acc_multivariate_outlier/acc-mv-outliercrp0globheava0.svg • R4.5/acc_shape_or_scale/shape-or-scale-plot-for-crp-0-ok.svg • R4.5/com_item_missingness/item-missingness-no-labels.svg • R4.5/com_item_missingness/item-missingness-w-labels.svg • R4.5/com_segment_missingness/segment-missingness-plot-ok.svg • R4.5/com_segment_missingness/segment-missingness-plot-r1-ok.svg • R4.5/com_segment_missingness/segment-missingness-plot-r2-ok.svg • R4.5/com_segment_missingness/segment-missingness-plot-r3-ok.svg • R4.5/con_contradictions/one-cat-contradiction-plot-ok.svg • R4.5/con_contradictions/summary-contradiction-plot-ok.svg • R4.5/con_contradictions_redcap/one-cat-contradiction-plot-ok.svg • R4.5/con_contradictions_redcap/summary-contradiction-plot-ok.svg • R4.5/con_limit_deviations/con-limit-deviations-4-hists-1-val.svg • R4.5/con_limit_deviations/con-limit-deviations-for-reverted.svg • R4.5/con_limit_deviations/con-limit-deviations-histgrms-misscds.svg • R4.5/con_limit_deviations/con-limit-deviations-nothing-within.svg • R4.5/con_limit_deviations/con-limit-deviations-quest-dt-0.svg • R4.5/con_limit_deviations/con-limit-deviations-reverse-w-1-0-max.svg • R4.5/int_datatype_matrix/intdtpart-interview.svg • R4.5/int_datatype_matrix/intdtpart-lab.svg • R4.5/int_datatype_matrix/intdtpart-phys-exam.svg • R4.5/int_datatype_matrix/intdtpart-questionnaire.svg • R4.5/int_datatype_matrix/intdtpart-study.svg • R4.5/int_datatype_matrix/integrity-datatype.svg • R4.5/plots/acc-distributions-def-edu0.svg • R4.5/plots/acc-distributions-gr-dbp0.svg • R4.5/plots/acc-multivariate-outlier-test-1.svg • R4.5/plots/acc-univariate-outlier-r-dbp-0.svg • R4.5/plots/con-contradictions-all-checks.svg • R4.5/plots/con-contradictions-by-tag.svg • R4.5/plots/con-contradictions-logical-age-checks-only.svg • R4.5/plots/con-contradictions-rc-all-checks.svg • R4.5/plots/con-contradictions-rc-by-tag.svg • R4.5/plots/con-contradictions-rc-logical-checks-only.svg • R4.5/plots/con-limit-deviations-all-item.svg • R4.5/plots/con-limit-deviations-all-quest-dt.svg • R4.5/plots/con-limit-deviations-all-sbp-0.svg • R4.5/plots/con-limit-deviations-low-item.svg • R4.5/plots/con-limit-deviations-low-quest-dt.svg • R4.5/plots/con-limit-deviations-low-sbp-0.svg • R4.5/plots/con-limit-deviations-upp-item.svg • R4.5/plots/con-limit-deviations-upp-quest-dt.svg • R4.5/plots/con-limit-deviations-upp-sbp-0.svg • R4.5/plots/empty-reportsummarytable.svg • R4.5/plots/heatmap-with-1-cat-var.svg • R4.5/plots/heatmap-with-2-cat-vars-but-w-o-strata-vars.svg • R4.5/plots/heatmap-with-2-cat-vars-but-w-strata-vars.svg • R4.5/plots/int-datatype-matrix-reportsummarytable.svg • R4.5/plots/int-datatype-matrix-segment-v50000.svg • R4.5/plots/int-datatype-matrix.svg • R4.5/plots/loess-def-dbp0.svg • R4.5/plots/loess-def-edu0.svg • R4.5/plots/loess-fac-dbp0.svg • R4.5/plots/loess-fac-edu0.svg • R4.5/plots/margins-dbp0.svg • R4.5/plots/margins-edu0.svg • R4.5/plots/pro-applicability-matrix-reportsummarytable.svg • R4.5/plots/pro-applicability-matrix-segment-v50000.svg • R4.5/plots/pro-applicability-matrix.svg • R4.5/plots/reportsummarytable-cont.svg • R4.5/plots/shape-or-scale-dbp0.svg • R4.5/prep_render_pie_charts/acc-varcomp-observer.svg • R4.5/prep_render_pie_charts/com-item-missingness.svg • R4.5/print/app-ex-repsumtab.svg • R4.5/print/im-empty-repsumtab.svg • R4.5/print/im-ex1-repsumtab.svg • R4.5/print/im-ex2-repsumtab.svg • R4.5/pro_applicability_matrix/appmatrix-plot-ok.svg • R4.5/pro_applicability_matrix/appmatrix-segment-v10000.svg • R4.5/util_heatmap_1th/util-heatmap-1th-1.svg • R4.5/util_heatmap_1th/util-heatmap-1th-2.svg • R4.5/util_heatmap_1th/util-heatmap-1th-3.svg Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [17s/47s] OK * checking PDF version of manual ... [48s/140s] OK * checking HTML version of manual ... [34s/90s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR