Install log for 'copula'

* installing *source* package ‘copula’ ...
** this is package ‘copula’ version ‘1.1-5’
** package ‘copula’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/copula/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c An.c -o An.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c ecIndepTest.c -o ecIndepTest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c empcop.c -o empcop.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c evtest.c -o evtest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c exchtest.c -o exchtest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c fgm.c -o fgm.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c gof.c -o gof.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c indepTest_utils.c -o indepTest_utils.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c init.c -o init.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c logseries.c -o logseries.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c multIndepTest.c -o multIndepTest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c multSerialIndepTest.c -o multSerialIndepTest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c polyn_eval.c -o polyn_eval.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rF01Frank.c -o rF01Frank.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rF01Joe.c -o rF01Joe.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rLog.c -o rLog.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c rSibuya.c -o rSibuya.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c retstable.c -o retstable.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c serialIndepTest.c -o serialIndepTest.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I./gsl -I./gsl/specfunc  -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c set_utils.c -o set_utils.o
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o copula.so An.o ecIndepTest.o empcop.o evtest.o exchtest.o fgm.o gof.o indepTest_utils.o init.o logseries.o multIndepTest.o multSerialIndepTest.o polyn_eval.o rF01Frank.o rF01Joe.o rLog.o rSibuya.o retstable.o serialIndepTest.o set_utils.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/copula/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/copula/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/copula/src'
installing to /data/gannet/ripley/R/packages/tests-devel/copula.Rcheck/00LOCK-copula/00new/copula/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for ‘%in%’ from package ‘base’ in package ‘copula’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (copula)