* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/constrainedKriging.Rcheck’ * using R Under development (unstable) (2025-02-19 r87756) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘constrainedKriging/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘constrainedKriging’ version ‘0.2-11’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘constrainedKriging’ can be installed ... [16s/23s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/constrainedKriging-00install.html' for details. * used C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [22s/70s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [0m/30m] ERROR Running examples in ‘constrainedKriging-Ex.R’ failed The error most likely occurred in: > ### Name: CKrige > ### Title: Constrained, Covariance-matching Constrained and Universal > ### Kriging > ### Aliases: CKrige CKrige.points CKrige.polygons CKrige-methods > ### CKrige,formula,data.frame,formula,preCKrigePoints-method > ### CKrige,formula,data.frame,formula,preCKrigePolygons-method > ### print.CKrige.exout.polygons summary.CKrige.exout.polygons > ### print.CKrige.exout.points summary.CKrige.exout.points > ### Keywords: methods > > ### ** Examples > > > > > ### example 7: universal block Kriging of mean over whole domain > ### cf chapter 4 of vignette of package georob > ### (https://CRAN.R-project.org/package=georob) > if(!requireNamespace("gstat", quietly = TRUE)){ + stop("install package gstat to run example") + } > ### load coalash data > data(coalash, package="gstat") > > ### generate SpatialPointsDataFrame covering entire domain of coalash data > coalash.domain <- rbind(c(0.5,0), c(16.5,0), c(16.5,24), c(0.5,24), c(0.5,0)) > coalash.domain <- SpatialPolygonsDataFrame( + SpatialPolygons(list(Polygons(list(Polygon(coalash.domain)), ID= "domain"))), + data=data.frame(x=8.5,y=12,row.names="domain")) > > ### universal block Kriging > preCK_coalash <- preCKrige(newdata = coalash.domain, model = covmodel(modelname = + "exponential", mev = 1.023, nugget = 0, variance = 0.268, + scale = 1.907), pwidth = 16, pheight = 24) > UK_coalash <- CKrige(formula = coalash ~ x, data = coalash, + locations = ~ x+y, object = preCK_coalash, method = 1) * checking PDF version of manual ... [8s/21s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR