• using R Under development (unstable) (2025-12-28 r89254)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)     GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
• running under: Fedora Linux 42 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘collapse/DESCRIPTION’ ... OK
• this is package ‘collapse’ version ‘2.1.5’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘collapse’ can be installed ... [396s/146s] OK See the install log for details.
• used C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
• used C++ compiler: ‘g++ (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [106s/107s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... NOTE File ‘collapse/libs/collapse.so’:   Found non-API calls to R: ‘ATTRIB’, ‘SET_ATTRIB’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points.
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [40s/41s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [348s/351s] ERROR   Running ‘testthat.R’ [347s/351s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # rm(list = ls())   > # Sys.setenv(R_TESTS = "")   > library(testthat)   > options(collapse_export_F = TRUE)   > # library(collapse)   >   > test_check("collapse")   Loading required package: collapse   collapse 2.1.5, see ?`collapse-package` or ?`collapse-documentation`      Attaching package: 'collapse'      The following object is masked from 'package:stats':          D      [ FAIL 1 | WARN 0 | SKIP 2 | PASS 17726 ]      ══ Skipped tests (2) ═══════════════════════════════════════════════════════════   • Sys.getenv("OMP") == "TRUE" is not TRUE (1):     'test-miscellaneous-issues.R:434:3'   • empty test (1):      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-data.table.R:216:3'): creating columns and printing works after passing a data.table through collapse functions ──   Error in ``[.data.table`(dt, , `:=`(new, 1))`: Internal error in assign: selfrefnames is ok but maxLength(names) [12] != maxLength(dt) [1036]. Please report to the data.table issues tracker.   Backtrace:        ▆     1. ├─testthat::expect_silent(dt[, `:=`(new, 1)]) at test-data.table.R:216:3     2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)     3. │ ├─testthat (local) .capture(...)     4. │ │ ├─withr::with_output_sink(...)     5. │ │ │ └─base::force(code)     6. │ │ ├─base::withCallingHandlers(...)     7. │ │ └─base::withVisible(code)     8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))     9. ├─dt[, `:=`(new, 1)]    10. └─data.table:::`[.data.table`(dt, , `:=`(new, 1))      [ FAIL 1 | WARN 0 | SKIP 2 | PASS 17726 ]   Error:   ! Test failures.   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [33s/33s] OK
• checking PDF version of manual ... [23s/23s] OK
• checking HTML version of manual ... [33s/33s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR, 1 NOTE