* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/cmm.Rcheck’
* using R Under development (unstable) (2025-02-14 r87716)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘cmm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cmm’ version ‘1.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘cmm’ can be installed ... [8s/11s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/cmm-00install.html' for details.
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/28s] OK
* checking Rd files ... NOTE
checkRd: (-1) TestCronbachAlpha.Rd:74: Lost braces; missing escapes or markup?
    74 |  the value of \emph{G}^2 at the 2 alpha level is used. For alpha = 0.05, H01 must be rejected if \emph{G}^2 > 2.71 (i.e., \emph{p} = .10) and r_{alpha} > c.
       |                                                                                                                                                 ^
checkRd: (-1) TestCronbachAlpha.Rd:76: Lost braces; missing escapes or markup?
    76 |  r_{alpha} = 0.793) is significantly above .75.
       |    ^
checkRd: (-1) TestCronbachAlpha.Rd:85: Lost braces
    85 |  (i.e., r_{alpha_{g1}} = 0.793 and r_{alpha_{g1}} = 0.737) are equal.
       |           ^
checkRd: (-1) TestCronbachAlpha.Rd:85: Lost braces; missing escapes or markup?
    85 |  (i.e., r_{alpha_{g1}} = 0.793 and r_{alpha_{g1}} = 0.737) are equal.
       |                  ^
checkRd: (-1) TestCronbachAlpha.Rd:85: Lost braces
    85 |  (i.e., r_{alpha_{g1}} = 0.793 and r_{alpha_{g1}} = 0.737) are equal.
       |                                      ^
checkRd: (-1) TestCronbachAlpha.Rd:85: Lost braces; missing escapes or markup?
    85 |  (i.e., r_{alpha_{g1}} = 0.793 and r_{alpha_{g1}} = 0.737) are equal.
       |                                             ^
checkRd: (-1) TestCronbachAlpha.Rd:93: Lost braces
    93 |  that the alphas of the two dependent samples (i.e., r_{alpha_{t1}} = 0.793 and r_{alpha_{t1}} = 0.696) are not equal to each other.
       |                                                        ^
checkRd: (-1) TestCronbachAlpha.Rd:93: Lost braces; missing escapes or markup?
    93 |  that the alphas of the two dependent samples (i.e., r_{alpha_{t1}} = 0.793 and r_{alpha_{t1}} = 0.696) are not equal to each other.
       |                                                               ^
checkRd: (-1) TestCronbachAlpha.Rd:93: Lost braces
    93 |  that the alphas of the two dependent samples (i.e., r_{alpha_{t1}} = 0.793 and r_{alpha_{t1}} = 0.696) are not equal to each other.
       |                                                                                   ^
checkRd: (-1) TestCronbachAlpha.Rd:93: Lost braces; missing escapes or markup?
    93 |  that the alphas of the two dependent samples (i.e., r_{alpha_{t1}} = 0.793 and r_{alpha_{t1}} = 0.696) are not equal to each other.
       |                                                                                          ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [9s/14s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE