• using R Under development (unstable) (2024-12-24 r87461)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (GCC) 14.2.0     GNU Fortran (GCC) 14.2.0
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘clam/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘clam’ version ‘2.6.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘clam’ can be installed ... [46s/119s] OK See the install log for details.
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [14s/41s] OK
• checking whether the package can be loaded with stated dependencies ... [14s/38s] OK
• checking whether the package can be unloaded cleanly ... [14s/39s] OK
• checking whether the namespace can be loaded with stated dependencies ... [13s/39s] OK
• checking whether the namespace can be unloaded cleanly ... [14s/34s] OK
• checking loading without being on the library search path ... [13s/34s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [66s/138s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [14s/37s] ERROR Running examples in ‘clam-Ex.R’ failed The error most likely occurred in: > ### Name: add.dates > ### Title: Add dates to age-depth plots > ### Aliases: add.dates > > ### ** Examples > > clam(coredir=tempfile()) The run's files will be put in this folder: /tmp/RtmpuViFR1/working_dir/RtmpMAi3I4/file15d9e41a1e369d/Example Error in dir.create(dir, showWarnings = FALSE, recursive = TRUE) :   zero-length 'path' argument Calls: clam -> .validateDirectoryName -> dir.create Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [29s/71s] ERROR Error(s) in re-building vignettes: --- re-building ‘clam.Rmd’ using rmarkdown Quitting from lines 31-32 [unnamed-chunk-4] (clam.Rmd) Error: processing vignette 'clam.Rmd' failed with diagnostics: zero-length 'path' argument --- failed re-building ‘clam.Rmd’ SUMMARY: processing the following file failed:   ‘clam.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [7s/12s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 ERRORs