* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/cfma.Rcheck’
* using R Under development (unstable) (2025-02-14 r87716)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘cfma/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cfma’ version ‘1.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘cfma’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/cfma-00install.html' for details.
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/26s] OK
* checking Rd files ... NOTE
checkRd: (-1) FMA.concurrent.CV.Rd:47: Lost braces
    47 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.concurrent.CV.Rd:49: Lost braces
    49 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.CV.Rd:51: Lost braces
    51 |         \code{fitted}{: the fitted value of \code{M}}
       |                      ^
checkRd: (-1) FMA.concurrent.CV.Rd:53: Lost braces
    53 |         \code{lambda}{: the chosen \eqn{\lambda} value}
       |                      ^
checkRd: (-1) FMA.concurrent.CV.Rd:57: Lost braces
    57 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.concurrent.CV.Rd:59: Lost braces
    59 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.CV.Rd:61: Lost braces
    61 |         \code{fitted}{: the fitted value of \code{Y}}
       |                      ^
checkRd: (-1) FMA.concurrent.CV.Rd:63: Lost braces
    63 |         \code{lambda}{: the chosen \eqn{\lambda} value}
       |                      ^
checkRd: (-1) FMA.concurrent.CV.Rd:67: Lost braces
    67 |         \code{coefficients}{: the coefficient with respect to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.CV.Rd:69: Lost braces
    69 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.concurrent.CV.Rd:73: Lost braces
    73 |         \code{coefficients}{: the coefficient with respect to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.CV.Rd:75: Lost braces
    75 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.concurrent.Rd:47: Lost braces
    47 |         \code{coefficient}{the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.concurrent.Rd:49: Lost braces
    49 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.Rd:51: Lost braces
    51 |         \code{fitted}{: the fitted value of \code{M}}
       |                      ^
checkRd: (-1) FMA.concurrent.Rd:53: Lost braces
    53 |         \code{lambda}{: \eqn{\lambda} value}
       |                      ^
checkRd: (-1) FMA.concurrent.Rd:57: Lost braces
    57 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.concurrent.Rd:59: Lost braces
    59 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.Rd:61: Lost braces
    61 |         \code{fitted}{: the fitted value of \code{Y}}
       |                      ^
checkRd: (-1) FMA.concurrent.Rd:63: Lost braces
    63 |         \code{lambda}{: \eqn{\lambda} value}
       |                      ^
checkRd: (-1) FMA.concurrent.Rd:67: Lost braces
    67 |         \code{coefficients}{: the coefficient with respect to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.Rd:69: Lost braces
    69 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.concurrent.Rd:73: Lost braces
    73 |         \code{coefficients}{: the coefficient with respect to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.Rd:75: Lost braces
    75 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.concurrent.boot.Rd:57: Lost braces
    57 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.boot.Rd:59: Lost braces
    59 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.boot.Rd:63: Lost braces
    63 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.boot.Rd:65: Lost braces
    65 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.boot.Rd:69: Lost braces
    69 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.boot.Rd:71: Lost braces
    71 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.boot.Rd:75: Lost braces
    75 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.boot.Rd:77: Lost braces
    77 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.concurrent.boot.Rd:81: Lost braces
    81 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.concurrent.boot.Rd:83: Lost braces
    83 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.CV.Rd:63: Lost braces
    63 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.historical.CV.Rd:65: Lost braces
    65 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.CV.Rd:67: Lost braces
    67 |         \code{fitted}{: the fitted value of \code{M}}
       |                      ^
checkRd: (-1) FMA.historical.CV.Rd:69: Lost braces
    69 |         \code{lambda1}{: the chosen \eqn{\lambda} value on the \eqn{s} domain}
       |                       ^
checkRd: (-1) FMA.historical.CV.Rd:71: Lost braces
    71 |         \code{lambda2}{: the chosen \eqn{\lambda} value on the \eqn{t} domain}
       |                       ^
checkRd: (-1) FMA.historical.CV.Rd:75: Lost braces
    75 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.historical.CV.Rd:77: Lost braces
    77 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.CV.Rd:79: Lost braces
    79 |         \code{fitted}{: the fitted value of \code{Y}}
       |                      ^
checkRd: (-1) FMA.historical.CV.Rd:81: Lost braces
    81 |         \code{lambda1}{: the chosen \eqn{\lambda} value on the \eqn{s} domain}
       |                       ^
checkRd: (-1) FMA.historical.CV.Rd:83: Lost braces
    83 |         \code{lambda2}{: the chosen \eqn{\lambda} value on the \eqn{t} domain}
       |                       ^
checkRd: (-1) FMA.historical.CV.Rd:87: Lost braces
    87 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.historical.CV.Rd:91: Lost braces
    91 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.historical.Rd:66: Lost braces
    66 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.historical.Rd:68: Lost braces
    68 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.Rd:70: Lost braces
    70 |         \code{fitted}{: the fitted value of \code{M}}
       |                      ^
checkRd: (-1) FMA.historical.Rd:72: Lost braces
    72 |         \code{lambda1}{: the \eqn{\lambda} value on the \eqn{s} domain}
       |                       ^
checkRd: (-1) FMA.historical.Rd:74: Lost braces
    74 |         \code{lambda2}{: the \eqn{\lambda} value on the \eqn{t} domain}
       |                       ^
checkRd: (-1) FMA.historical.Rd:78: Lost braces
    78 |         \code{coefficient}{: the estimated coefficient with respect to the basis function}
       |                           ^
checkRd: (-1) FMA.historical.Rd:80: Lost braces
    80 |         \code{curve}{: the estimated coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.Rd:82: Lost braces
    82 |         \code{fitted}{: the fitted value of \code{Y}}
       |                      ^
checkRd: (-1) FMA.historical.Rd:84: Lost braces
    84 |         \code{lambda1}{: the \eqn{\lambda} value on the \eqn{s} domain}
       |                       ^
checkRd: (-1) FMA.historical.Rd:86: Lost braces
    86 |         \code{lambda2}{: the \eqn{\lambda} value on the \eqn{t} domain}
       |                       ^
checkRd: (-1) FMA.historical.Rd:90: Lost braces
    90 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.historical.Rd:94: Lost braces
    94 |         \code{curve}{: the estimated causal curve}
       |                     ^
checkRd: (-1) FMA.historical.boot.Rd:76: Lost braces
    76 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.historical.boot.Rd:78: Lost braces
    78 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.boot.Rd:82: Lost braces
    82 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.historical.boot.Rd:84: Lost braces
    84 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.boot.Rd:88: Lost braces
    88 |         \code{coefficients}{: the result of the coefficient estimates corresponding to the basis function}
       |                            ^
checkRd: (-1) FMA.historical.boot.Rd:90: Lost braces
    90 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.boot.Rd:94: Lost braces
    94 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
checkRd: (-1) FMA.historical.boot.Rd:98: Lost braces
    98 |         \code{curve}{: the point-wise estimate of the coefficient curve}
       |                     ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE