- using R Under development (unstable) (2025-02-26 r87830)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
- running under: Fedora Linux 40 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘cards/DESCRIPTION’ ... OK
- this is package ‘cards’ version ‘0.5.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘cards’ can be installed ... [13s/20s] OK
See the install log for details.
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [21s/32s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... ERROR
Running examples in ‘cards-Ex.R’ failed
The error most likely occurred in:
> ### Name: alias_as_fmt_fn
> ### Title: Convert Alias to Function
> ### Aliases: alias_as_fmt_fn
>
> ### ** Examples
>
> alias_as_fmt_fn(1)
function (x)
{
res <- ifelse(is.na(x), NA_character_, str_trim(format(round_fun(x *
scale, digits = digits), nsmall = digits)))
if (!is.null(width)) {
res <- ifelse(nchar(res) >= width | is.na(res), res,
paste0(strrep(" ", width - nchar(res)), res))
}
res
}
<bytecode: 0x2724dee0>
<environment: 0x2724f878>
> alias_as_fmt_fn("xx.x")
Error in strsplit(x, as.character(split), fixed, perl, useBytes) :
NA in coercion to Rboolean
Calls: alias_as_fmt_fn -> ifelse -> %>% -> unlist -> strsplit
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [376s/267s] ERROR
Running ‘testthat.R’ [376s/266s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(cards)
Attaching package: 'cards'
The following object is masked from 'package:testthat':
matches
>
> test_check("cards")
Starting 2 test processes
[ FAIL 1 | WARN 0 | SKIP 108 | PASS 248 ]
══ Skipped tests (108) ═════════════════════════════════════════════════════════
• On CRAN (108): 'test-apply_fmt_fn.R:76:3', 'test-apply_fmt_fn.R:119:3',
'test-add_calculated_row.R:2:3', 'test-add_calculated_row.R:25:3',
'test-add_calculated_row.R:33:3', 'test-ard_attributes.R:5:3',
'test-ard_attributes.R:29:3', 'test-ard_complex.R:87:3',
'test-ard_complex.R:130:3', 'test-ard_categorical.R:6:3',
'test-ard_categorical.R:77:3', 'test-ard_categorical.R:103:3',
'test-ard_categorical.R:221:3', 'test-ard_categorical.R:245:3',
'test-ard_categorical.R:403:3', 'test-ard_categorical.R:510:3',
'test-ard_categorical.R:644:3', 'test-ard_categorical.R:724:3',
'test-ard_categorical.R:833:3', 'test-ard_categorical.R:875:3',
'test-ard_categorical.R:1102:3', 'test-ard_dichotomous.R:11:3',
'test-ard_dichotomous.R:46:3', 'test-ard_dichotomous.R:100:3',
'test-ard_hierarchical.R:12:3', 'test-ard_hierarchical.R:97:3',
'test-ard_hierarchical.R:107:3', 'test-ard_hierarchical.R:141:3',
'test-ard_hierarchical.R:234:3', 'test-ard_hierarchical.R:287:3',
'test-ard_hierarchical.R:310:3', 'test-ard_missing.R:7:3',
'test-ard_missing.R:31:3', 'test-ard_pairwise.R:54:3',
'test-ard_pairwise.R:90:3', 'test-ard_pairwise.R:98:3',
'test-ard_stack.R:251:3', 'test-ard_stack.R:269:3', 'test-ard_stack.R:300:3',
'test-ard_stack_hierarchical.R:52:3', 'test-ard_stack_hierarchical.R:78:3',
'test-ard_stack_hierarchical.R:144:3', 'test-ard_stack_hierarchical.R:158:3',
'test-ard_stack_hierarchical.R:243:3', 'test-ard_stack_hierarchical.R:257:3',
'test-ard_stack_hierarchical.R:351:3', 'test-ard_stack_hierarchical.R:426:3',
'test-ard_stack_hierarchical.R:437:3', 'test-ard_stack_hierarchical.R:472:3',
'test-ard_stack_hierarchical.R:510:3', 'test-ard_strata.R:2:3',
'test-ard_total_n.R:2:3', 'test-as_card.R:2:3', 'test-as_card.R:22:3',
'test-as_nested_list.R:2:3', 'test-bind_ard.R:14:3', 'test-bind_ard.R:28:3',
'test-bind_ard.R:59:3', 'test-check_ard_structure.R:2:3',
'test-eval_capture_conditions.R:3:3', 'test-eval_capture_conditions.R:46:3',
'test-eval_capture_conditions.R:72:3', 'test-get_ard_statistics.R:4:3',
'test-mock.R:3:3', 'test-mock.R:14:3', 'test-mock.R:26:3',
'test-mock.R:36:3', 'test-mock.R:47:3', 'test-mock.R:58:3',
'test-mock.R:69:3', 'test-mock.R:79:3', 'test-mock.R:90:3',
'test-mock.R:99:3', 'test-mock.R:107:3', 'test-options.R:31:3',
'test-print.R:2:3', 'test-print_ard_conditions.R:3:3',
'test-print_ard_conditions.R:71:3', 'test-print_ard_conditions.R:100:3',
'test-print_ard_conditions.R:131:3', 'test-print_ard_conditions.R:145:3',
'test-process_selectors.R:52:3', 'test-process_selectors.R:85:3',
'test-rename_ard_columns.R:14:3', 'test-rename_ard_columns.R:25:3',
'test-rename_ard_groups.R:10:3', 'test-rename_ard_groups.R:19:3',
'test-rename_ard_groups.R:36:3', 'test-round5.R:2:3',
'test-shift_ard_columns.R:9:3', 'test-shuffle_ard.R:9:3',
'test-shuffle_ard.R:68:3', 'test-shuffle_ard.R:79:3',
'test-shuffle_ard.R:198:3', 'test-tidy_ard_row_order.R:7:3',
'test-tidy_as_ard.R:3:3', 'test-update_ard.R:12:3', 'test-update_ard.R:21:3',
'test-update_ard.R:30:3', 'test-update_ard.R:58:3', 'test-update_ard.R:66:3',
'test-ard_continuous.R:7:3', 'test-ard_continuous.R:35:3',
'test-ard_continuous.R:86:3', 'test-ard_continuous.R:106:3',
'test-ard_continuous.R:234:3', 'test-ard_continuous.R:288:3',
'test-ard_continuous.R:421:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-apply_fmt_fn.R:44:3'): apply_fmt_fn() works with xx specification ──
<dplyr:::mutate_error/rlang_error/error/condition>
Error in `dplyr::mutate(x, stat_fmt = pmap(list(.data$stat, .data$variable,
.data$stat_name, .data$fmt_fn, .data$stat_fmt), function(stat,
variable, stat_name, fn, stat_fmt) {
if (!is.null(fn) && is.null(stat_fmt)) {
tryCatch(do.call(alias_as_fmt_fn(fn, variable, stat_name),
args = list(stat)), error = function(e) {
cli::cli_abort(c("There was an error applying the formatting function to\n statistic {.val {stat_name}} for variable {.val {variable}}.",
i = "Perhaps try formmatting function {.fun as.character}? See error message below:",
x = conditionMessage(e)), call = get_cli_abort_call())
})
}
else {
stat_fmt
}
}))`: i In argument: `stat_fmt = pmap(...)`.
Caused by error in `apply_fmt_fn()`:
! There was an error applying the formatting function to statistic "mean" for variable "mpg".
i Perhaps try formmatting function `as.character()`? See error message below:
x NA in coercion to Rboolean
[ FAIL 1 | WARN 0 | SKIP 108 | PASS 248 ]
Error: Test failures
Execution halted
- checking PDF version of manual ... [11s/12s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 2 ERRORs