* installing *source* package ‘bsts’ ...
** package ‘bsts’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bsts/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c aggregate_time_series.cc -o aggregate_time_series.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c bsts.cc -o bsts.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from bsts.cc:20:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from bsts.cc:22:
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bsts.cc: In function 'SEXPREC* analysis_common_r_bsts_one_step_prediction_errors_(SEXP, SEXP, SEXP)':
bsts.cc:211:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
211 | for (int i = 0; i < cutpoints.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
bsts.cc:217:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::future<void> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
217 | for (int i = 0; i < futures.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~
bsts.cc:223:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Matrix>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
223 | for (int i = 0; i < prediction_errors.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c bsts_init.cc -o bsts_init.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c create_dynamic_intercept_state_model.cpp -o create_dynamic_intercept_state_model.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c create_shared_state_model.cpp -o create_shared_state_model.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c create_state_model.cpp -o create_state_model.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c dirm.cc -o dirm.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c dynamic_intercept_model_manager.cc -o dynamic_intercept_model_manager.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c get_date_ranges.cc -o get_date_ranges.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from create_state_model.h:24,
from create_dynamic_intercept_state_model.h:21,
from create_dynamic_intercept_state_model.cpp:19:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c mbsts.cc -o mbsts.o
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from create_state_model.h:24,
from create_state_model.cpp:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
create_dynamic_intercept_state_model.cpp: In member function 'BOOM::Ptr<BOOM::DynamicInterceptStateModel> BOOM::bsts::DynamicInterceptStateModelFactory::CreateStateModel(BOOM::DynamicInterceptRegressionModel*, SEXP, const std::string&)':
create_dynamic_intercept_state_model.cpp:86:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
86 | for (int i = 0; i < class_info.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from create_state_model.h:24,
from create_shared_state_model.h:21,
from create_shared_state_model.cpp:19:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from dirm.cc:20:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from dynamic_intercept_model_manager.h:20,
from dynamic_intercept_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:29,
from create_dynamic_intercept_state_model.cpp:20:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/Glm/RegressionModel.hpp:33,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionStateModel.hpp:23,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:26:
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp: In instantiation of 'void BOOM::SufstatDataPolicy<D, S>::refresh_suf() [with D = BOOM::UnivData<double>; S = BOOM::GaussianSuf]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:145:5: required from 'void BOOM::SufstatDataPolicy<D, S>::set_data(const DatasetType&) [with D = BOOM::UnivData<double>; S = BOOM::GaussianSuf; DatasetType = std::vector<BOOM::Ptr<BOOM::UnivData<double> > >]'
145 | refresh_suf();
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:143:8: required from here
143 | void SufstatDataPolicy<D, S>::set_data(const DatasetType &d) {
| ^~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:83:24: warning: comparison of integer expressions of different signedness: 'BOOM::uint' {aka 'long int'} and 'std::vector<BOOM::Ptr<BOOM::UnivData<double> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
83 | for (uint i = 0; i < d.size(); ++i) suf_->update(d[i]);
| ~~^~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/PosteriorSamplers/DynamicRegressionArPosteriorSampler.hpp:23,
from create_state_model.cpp:42:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp: In member function 'virtual BOOM::SparseVector BOOM::DynamicRegressionArStateModel::observation_matrix(int) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp:121:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::GenericSparseMatrixBlock> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
121 | if (t >= expanded_predictors_.size()) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/HierarchicalRegressionHolidayStateModel.hpp:31,
from create_state_model.cpp:48:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function 'const BOOM::Holiday* BOOM::RegressionHolidayBaseImpl::holiday(int) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:69:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::Holiday> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
69 | return (t >= 0 && t < holidays_.size()) ? holidays_[t].get() : nullptr;
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function 'int BOOM::RegressionHolidayBaseImpl::which_holiday(int) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:111:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
111 | return (t >= 0 && t < which_holiday_.size()) ? which_holiday_[t] : -1;
| ~~^~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp: In member function 'int BOOM::RegressionHolidayBaseImpl::which_day(int) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/RegressionHolidayStateModel.hpp:121:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
121 | return (t >= 0 && t < which_day_.size()) ? which_day_[t] : -1;
| ~~^~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26,
from create_shared_state_model.h:24:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'bool BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here
214 | return state_manager_.has_series_specific_state();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
47 | for (int i = 0; i < proxy_models_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'void BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here
380 | state_manager_.observe_time_dimension(t);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
86 | for (int m = 0; m < proxy_models_.size(); ++m) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
create_state_model.cpp: In member function 'BOOM::Ptr<BOOM::StateModel> BOOM::bsts::StateModelFactory::CreateStateModel(BOOM::ScalarStateSpaceModelBase*, SEXP, const std::string&)':
create_state_model.cpp:191:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
191 | for (int i = 0; i < class_info.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c mixed_frequency.cc -o mixed_frequency.o
In file included from create_dynamic_intercept_state_model.h:21,
from dynamic_intercept_model_manager.cc:18:
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
dynamic_intercept_model_manager.cc: In member function 'virtual void BOOM::bsts::DynamicInterceptModelManager::AddDataFromList(SEXP)':
dynamic_intercept_model_manager.cc:213:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
213 | while(observation_number < response.size() &&
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:30:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/DynamicInterceptRegression.hpp:29,
from create_state_model.cpp:40:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/GammaModel.hpp:29,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/ChisqModel.hpp:21,
from /data/gannet/ripley/R/test-dev/Boom/include/r_interface/prior_specification.hpp:23,
from create_state_model.cpp:25:
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp: In instantiation of 'void BOOM::SufstatDataPolicy<D, S>::refresh_suf() [with D = BOOM::UnivData<double>; S = BOOM::GaussianSuf]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:145:5: required from 'void BOOM::SufstatDataPolicy<D, S>::set_data(const DatasetType&) [with D = BOOM::UnivData<double>; S = BOOM::GaussianSuf; DatasetType = std::vector<BOOM::Ptr<BOOM::UnivData<double> > >]'
145 | refresh_suf();
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:143:8: required from here
143 | void SufstatDataPolicy<D, S>::set_data(const DatasetType &d) {
| ^~~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/Policies/SufstatDataPolicy.hpp:83:24: warning: comparison of integer expressions of different signedness: 'BOOM::uint' {aka 'long int'} and 'std::vector<BOOM::Ptr<BOOM::UnivData<double> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
83 | for (uint i = 0; i < d.size(); ++i) suf_->update(d[i]);
| ~~^~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from create_state_model.h:24,
from get_date_ranges.cc:23:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from mbsts.cc:20:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
get_date_ranges.cc: In function 'SEXPREC* analysis_common_r_get_date_ranges_(SEXP, SEXP)':
get_date_ranges.cc:62:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Date>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
62 | for (int i = 0; i < dates.size(); ++i) {
| ~~^~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from mbsts.cc:23:
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c model_manager.cc -o model_manager.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26,
from create_shared_state_model.h:24,
from mbsts.cc:24:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'bool BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here
214 | return state_manager_.has_series_specific_state();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
47 | for (int i = 0; i < proxy_models_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'void BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here
380 | state_manager_.observe_time_dimension(t);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
86 | for (int m = 0; m < proxy_models_.size(); ++m) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c multivariate_gaussian_model_manager.cc -o multivariate_gaussian_model_manager.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from create_state_model.h:24,
from mixed_frequency.cc:19:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c state_space_gaussian_model_manager.cc -o state_space_gaussian_model_manager.o
mixed_frequency.cc: In function 'void {anonymous}::TranscribeResponseData(const BOOM::Ptr<BOOM::AggregatedStateSpaceRegression>&, const BOOM::Ptr<BOOM::StateSpaceModel>&, BOOM::RErrorReporter*)':
mixed_frequency.cc:280:19: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Ptr<BOOM::StateSpace::MultiplexedDoubleData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::MultiplexedDoubleData> > >::size_type' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
280 | if (data.size() != imputed_data.size()) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
mixed_frequency.cc: In function 'std::vector<BOOM::Ptr<BOOM::FineNowcastingData>, std::allocator<BOOM::Ptr<BOOM::FineNowcastingData> > > {anonymous}::ComputeTrainingData(SEXP, SEXP, SEXP, SEXP, SEXP)':
mixed_frequency.cc:319:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
319 | && (which_month < target_series.size())
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c state_space_logit_model_manager.cc -o state_space_logit_model_manager.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from model_manager.cc:19:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from utils.h:24,
from multivariate_gaussian_model_manager.cc:19:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from model_manager.cc:28:
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from model_manager.cc:36:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp: In member function 'virtual BOOM::SparseVector BOOM::DynamicRegressionArStateModel::observation_matrix(int) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateModels/DynamicRegressionArStateModel.hpp:121:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::GenericSparseMatrixBlock> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
121 | if (t >= expanded_predictors_.size()) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from state_space_gaussian_model_manager.h:20,
from state_space_gaussian_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from create_shared_state_model.h:21,
from multivariate_gaussian_model_manager.cc:21:
create_state_model.h: In member function 'void BOOM::bsts::StateModelFactoryBase::InstallPostStateListElements()':
create_state_model.h:89:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::RListIoElement*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
89 | for (int i = 0; i < post_state_list_elements_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26,
from multivariate_gaussian_model_manager.h:25,
from model_manager.cc:25:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'bool BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here
214 | return state_manager_.has_series_specific_state();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
47 | for (int i = 0; i < proxy_models_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'void BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here
380 | state_manager_.observe_time_dimension(t);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
86 | for (int m = 0; m < proxy_models_.size(); ++m) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:26,
from multivariate_gaussian_model_manager.h:25,
from multivariate_gaussian_model_manager.cc:20:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'bool BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::has_series_specific_state() const [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:214:54: required from here
214 | return state_manager_.has_series_specific_state();
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:47:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
47 | for (int i = 0; i < proxy_models_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp: In instantiation of 'void BOOM::StateSpaceUtils::SharedStateModelManager<PROXY>::observe_time_dimension(int) [with PROXY = BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel>]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceRegressionModel.hpp:380:44: required from here
380 | state_manager_.observe_time_dimension(t);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/SharedStateModelManager.hpp:86:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> >, std::allocator<BOOM::Ptr<BOOM::ProxyScalarStateSpaceModel<BOOM::MultivariateStateSpaceRegressionModel> > > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
86 | for (int m = 0; m < proxy_models_.size(); ++m) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from state_space_logit_model_manager.h:20,
from state_space_logit_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_gaussian_model_manager.cc: In member function 'void BOOM::bsts::StateSpaceModelManager::AddData(const BOOM::Vector&, const std::vector<bool>&)':
state_space_gaussian_model_manager.cc:142:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
142 | for (int i = 0; i < response.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_gaussian_model_manager.cc: In member function 'virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)':
state_space_gaussian_model_manager.cc:177:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::StateSpace::MultiplexedDoubleData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::MultiplexedDoubleData> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
177 | for (int i = cutpoint + 1; i < data.size(); ++i) {
| ~~^~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c state_space_poisson_model_manager.cc -o state_space_poisson_model_manager.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from utils.h:25:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.hpp:23,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.hpp:23,
from state_space_logit_model_manager.cc:20:
/data/gannet/ripley/R/test-dev/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function 'int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::LatentDataImputerWorker> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
218 | for (int i = 0; i < workers_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_logit_model_manager.cc: In member function 'virtual BOOM::StateSpaceLogitModel* BOOM::bsts::StateSpaceLogitModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)':
state_space_logit_model_manager.cc:66:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
66 | for (int i = 0; i < successes.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
state_space_logit_model_manager.cc: In member function 'void BOOM::bsts::StateSpaceLogitModelManager::AddData(const BOOM::Vector&, const BOOM::Vector&, const BOOM::Matrix&, const std::vector<bool>&)':
state_space_logit_model_manager.cc:202:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
202 | for (int i = 0; i < successes.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c state_space_regression_model_manager.cc -o state_space_regression_model_manager.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c state_space_student_model_manager.cc -o state_space_student_model_manager.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c timestamp_info.cc -o timestamp_info.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from state_space_poisson_model_manager.h:20,
from state_space_poisson_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionAuxMixSampler.hpp:30,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionSpikeSlabSampler.hpp:24,
from state_space_poisson_model_manager.cc:25:
/data/gannet/ripley/R/test-dev/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function 'int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::LatentDataImputerWorker> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
218 | for (int i = 0; i < workers_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_poisson_model_manager.cc: In member function 'virtual BOOM::StateSpacePoissonModel* BOOM::bsts::StateSpacePoissonModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)':
state_space_poisson_model_manager.cc:85:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
85 | for (int i = 0; i < counts.size(); ++i) {
| ~~^~~~~~~~~~~~~~~
state_space_poisson_model_manager.cc: In member function 'void BOOM::bsts::StateSpacePoissonModelManager::AddData(const BOOM::Vector&, const BOOM::Vector&, const BOOM::Matrix&, const std::vector<bool>&)':
state_space_poisson_model_manager.cc:210:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
210 | for (int i = 0; i < counts.size(); ++i) {
| ~~^~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from state_space_gaussian_model_manager.h:20,
from state_space_regression_model_manager.h:20,
from state_space_regression_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I`/data/gannet/ripley/R/R-devel/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/data/gannet/ripley/R/test-dev/Boom/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c utils.cc -o utils.o
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from model_manager.h:22,
from state_space_student_model_manager.h:20,
from state_space_student_model_manager.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
state_space_regression_model_manager.cc: In member function 'virtual BOOM::StateSpaceRegressionModel* BOOM::bsts::StateSpaceRegressionModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)':
state_space_regression_model_manager.cc:75:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
75 | for (int i = 0; i < response.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_regression_model_manager.cc: In member function 'void BOOM::bsts::StateSpaceRegressionModelManager::AddData(const BOOM::Vector&, const BOOM::Matrix&, const std::vector<bool>&)':
state_space_regression_model_manager.cc:233:28: warning: comparison of integer expressions of different signedness: 'BOOM::uint' {aka 'long int'} and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
233 | if (nrow(predictors) != response.size()
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
state_space_regression_model_manager.cc:244:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
244 | for (int i = 0; i < response.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_regression_model_manager.cc: In member function 'virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceRegressionModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)':
state_space_regression_model_manager.cc:296:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::StateSpace::MultiplexedRegressionData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::MultiplexedRegressionData> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
296 | for (int i = cutpoint + 1; i < data.size(); ++i) {
| ~~^~~~~~~~~~~~~
state_space_regression_model_manager.cc:303:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::StateSpace::MultiplexedRegressionData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::MultiplexedRegressionData> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
303 | for (int i = cutpoint + 1; i < data.size(); ++i) {
| ~~^~~~~~~~~~~~~
timestamp_info.cc: In member function 'void BOOM::bsts::TimestampInfo::UnpackForecastTimestamps(SEXP)':
timestamp_info.cc:54:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
54 | for (int i = 1; i < forecast_timestamps_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
state_space_student_model_manager.cc: In member function 'virtual BOOM::StateSpaceStudentRegressionModel* BOOM::bsts::StateSpaceStudentModelManager::CreateBareModel(SEXP, SEXP, SEXP, BOOM::RListIoManager*)':
state_space_student_model_manager.cc:73:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
73 | for (int i = 0; i < response.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
state_space_student_model_manager.cc: In member function 'virtual BOOM::bsts::HoldoutErrorSampler BOOM::bsts::StateSpaceStudentModelManager::CreateHoldoutSampler(SEXP, int, bool, BOOM::Matrix*)':
state_space_student_model_manager.cc:183:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::StateSpace::AugmentedStudentRegressionData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::AugmentedStudentRegressionData> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
183 | for (int i = cutpoint + 1; i < data.size(); ++i) {
| ~~^~~~~~~~~~~~~
state_space_student_model_manager.cc:190:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::StateSpace::AugmentedStudentRegressionData>, std::allocator<BOOM::Ptr<BOOM::StateSpace::AugmentedStudentRegressionData> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
190 | for (int i = cutpoint + 1; i < data.size(); ++i) {
| ~~^~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from model_manager.h:23:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:23,
from utils.h:24,
from utils.cc:17:
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp: In member function 'int BOOM::ThreadWorkerPool::number_of_joinable_threads() const':
/data/gannet/ripley/R/test-dev/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::thread>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
215 | for (int i = 0; i < threads_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/StateSpaceModelBase.hpp:33:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::ZeroPaddedIdentityMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1269:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'BOOM::uint' {aka 'long int'} [-Wsign-compare]
1269 | for (size_t i = ncol_; i < lhs.size(); ++i) {
| ~~^~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1499:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1499 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_and_add(BOOM::VectorView, const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1508:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1508 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::multiply_inplace(BOOM::VectorView) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1517:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1517 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1525:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1525 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual BOOM::SpdMatrix BOOM::UpperLeftDiagonalMatrix::inner(const BOOM::ConstVectorView&) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1536:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1536 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'virtual void BOOM::UpperLeftDiagonalMatrix::add_to_block(BOOM::SubMatrix) const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1546:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1546 | for (int i = 0; i < diagonal_.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'void BOOM::UpperLeftDiagonalMatrix::check_diagonal_dimension(int, const std::vector<BOOM::Ptr<BOOM::UnivParams> >&)':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:1558:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<BOOM::Ptr<BOOM::UnivParams> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
1558 | if (dim < diagonal.size()) {
| ~~~~^~~~~~~~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp: In member function 'const BOOM::Vector& BOOM::DenseSparseRankOneMatrixBlock::dense_right() const':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/SparseMatrix.hpp:2052:31: warning: comparison of integer expressions of different signedness: 'std::vector<double>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
2052 | if (dense_right_.size() != right_.size()) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
utils.cc: In function 'void BOOM::bsts::DropUnforcedCoefficients(const BOOM::Ptr<BOOM::GlmModel>&, const BOOM::Vector&)':
utils.cc:28:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
28 | for (int i = 0; i < prior_inclusion_probs.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
utils.cc: In function 'std::vector<bool> BOOM::bsts::IsObserved(SEXP)':
utils.cc:58:25: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
58 | for (int i = 0; i < n; ++i) {
| ~~^~~
In file included from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/ConditionalIidKalmanFilter.hpp:22,
from /data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Multivariate/MultivariateStateSpaceModelBase.hpp:28,
from utils.h:25:
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp: In instantiation of 'void BOOM::MultivariateKalmanFilter<MARGINAL>::ensure_size(int) [with MARGINAL = BOOM::Kalman::ConditionallyIndependentMarginalDistribution]':
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:227:10: required from here
227 | void ensure_size(int time) override {
| ^~~~~~~~~~~
/data/gannet/ripley/R/test-dev/Boom/include/Models/StateSpace/Filters/MultivariateKalmanFilterBase.hpp:228:27: warning: comparison of integer expressions of different signedness: 'std::vector<BOOM::Kalman::ConditionallyIndependentMarginalDistribution, std::allocator<BOOM::Kalman::ConditionallyIndependentMarginalDistribution> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
228 | while(nodes_.size() <= time) {
| ~~~~~~~~~~~~~~^~~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o bsts.so aggregate_time_series.o bsts.o bsts_init.o create_dynamic_intercept_state_model.o create_shared_state_model.o create_state_model.o dirm.o dynamic_intercept_model_manager.o get_date_ranges.o mbsts.o mixed_frequency.o model_manager.o multivariate_gaussian_model_manager.o state_space_gaussian_model_manager.o state_space_logit_model_manager.o state_space_poisson_model_manager.o state_space_regression_model_manager.o state_space_student_model_manager.o timestamp_info.o utils.o /data/gannet/ripley/R/test-dev/Boom/lib/libboom.a
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bsts/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bsts/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bsts/src'
installing to /data/gannet/ripley/R/packages/tests-devel/bsts.Rcheck/00LOCK-bsts/00new/bsts/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bsts)