Install log for 'bsamGP'

* installing *source* package ‘bsamGP’ ...
** this is package ‘bsamGP’ version ‘1.2.5’
** package ‘bsamGP’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
using Fortran compiler: ‘GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bsamGP/src'
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c ToolsRfunc.c -o ToolsRfunc.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  ToolsRfunf.f90 -o ToolsRfunf.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsamTools.f90 -o bsamTools.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsamTools.f90 -o gbsamTools.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  blreg.f90 -o blreg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bqreg.f90 -o bqreg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bqreggetlogg.f90 -o bqreggetlogg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsad.f90 -o bsad.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaqam.f90 -o bsaqam.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaqamdpscale.f90 -o bsaqamdpscale.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaram.f90 -o bsaram.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaramdplocationscale.f90 -o bsaramdplocationscale.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaramdpscale.f90 -o bsaramdpscale.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsaramgetlogg.f90 -o bsaramgetlogg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbglmgetlogg.f90 -o gbglmgetlogg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gblogitKS.f90 -o gblogitKS.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gblogitMH.f90 -o gblogitMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbnegbinMH.f90 -o gbnegbinMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbpoisgammMH.f90 -o gbpoisgammMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbpoisMH.f90 -o gbpoisMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbprobitAC.f90 -o gbprobitAC.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsaramgetlogg.f90 -o gbsaramgetlogg.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarlogitKS.f90 -o gbsarlogitKS.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarlogitMH.f90 -o gbsarlogitMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarnegbinMH.f90 -o gbsarnegbinMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarpoisgammMH.f90 -o gbsarpoisgammMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarpoisMH.f90 -o gbsarpoisMH.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  gbsarprobitAC.f90 -o gbsarprobitAC.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  predictgbsam.f90 -o predictgbsam.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  predictbsam.f90 -o predictbsam.o
gfortran  -fpic  -g -O2 -mtune=native -Wall -pedantic  -c  bsarbig.f90 -o bsarbig.o
bsarbig.f90:48:29:

   48 | ndata(1)=count(xdata.le.a(1))
      |                             ^
Warning: ‘MEM[(real(kind=8)[0:D.6428] *)_882][0]’ may be used uninitialized [-Wmaybe-uninitialized]
gcc -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/lib64 -o bsamGP.so registerDynamicSymbol.o ToolsRfunc.o ToolsRfunf.o bsamTools.o gbsamTools.o blreg.o bqreg.o bqreggetlogg.o bsad.o bsaqam.o bsaqamdpscale.o bsaram.o bsaramdplocationscale.o bsaramdpscale.o bsaramgetlogg.o gbglmgetlogg.o gblogitKS.o gblogitMH.o gbnegbinMH.o gbpoisgammMH.o gbpoisMH.o gbprobitAC.o gbsaramgetlogg.o gbsarlogitKS.o gbsarlogitMH.o gbsarnegbinMH.o gbsarpoisgammMH.o gbsarpoisMH.o gbsarprobitAC.o predictgbsam.o predictbsam.o bsarbig.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -lm -lgfortran -lm -lquadmath
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bsamGP/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/bsamGP/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/bsamGP/src'
installing to /data/gannet/ripley/R/packages/tests-devel/bsamGP.Rcheck/00LOCK-bsamGP/00new/bsamGP/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bsamGP)