• using R Under development (unstable) (2025-02-21 r87787)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)     GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
• running under: Fedora Linux 40 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘bayesPop/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘bayesPop’ version ‘11.0-2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘bayesPop’ can be installed ... [71s/181s] OK See the install log for details.
• used C compiler: ‘gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [16s/44s] OK
• checking whether the package can be loaded with stated dependencies ... [15s/36s] OK
• checking whether the package can be unloaded cleanly ... [16s/41s] OK
• checking whether the namespace can be loaded with stated dependencies ... [16s/38s] OK
• checking whether the namespace can be unloaded cleanly ... [17s/40s] OK
• checking loading without being on the library search path ... [18s/46s] OK
• checking whether startup messages can be suppressed ... [18s/44s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [125s/283s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [27s/65s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [41s/103s] ERROR   Running ‘run_tests.R’ [23s/59s]   Running ‘test_functions.R’ [18s/43s] Running the tests in ‘tests/run_tests.R’ failed. Complete output:   > library(bayesPop)   Loading required package: bayesTFR   Loading required package: bayesLife   Loading required package: MortCast   Loading required package: wpp2017   > source('test_functions.R')   >   > CRAN <- TRUE   >   > test.expressions()      <=== Starting test of Population expressions ====   Loading required package: wpp2019   [gannet:1198544:0:1198544] Caught signal 11 (Segmentation fault: address not mapped to object at address 0x1)   ==== backtrace (tid:1198544) ====    0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7fb0caa90144]    1 /lib64/libucs.so.0(+0x2880d) [0x7fb0caa9180d]    2 /lib64/libucs.so.0(+0x289dd) [0x7fb0caa919dd]    3 /lib64/libc.so.6(+0x40fd0) [0x7fb0e344efd0]    4 /data/gannet/ripley/R/packages/tests-devel/bayesPop.Rcheck/bayesPop/libs/bayesPop.so(CCM+0x6fe) [0x7fb0caa11abe]    5 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x4ac448]    6 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x4ea795]    7 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x4e3dd6]    8 /data/gannet/ripley/R/R-devel/bin/exec/R(Rf_eval+0x173) [0x4d3893]    9 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x4d771f]   10 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x4d33c1]   11 /data/gannet/ripley/R/R-devel/bin/exec/R(Rf_eval+0x24b) [0x4d396b]   12 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x5238b0]   13 /data/gannet/ripley/R/R-devel/bin/exec/R(run_Rmainloop+0x4b) [0x528aab]   14 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x528af4]   15 /data/gannet/ripley/R/R-devel/bin/exec/R() [0x41884f]   16 /lib64/libc.so.6(+0x2a088) [0x7fb0e3438088]   17 /lib64/libc.so.6(__libc_start_main+0x8b) [0x7fb0e343814b]   18 /data/gannet/ripley/R/R-devel/bin/exec/R(_start+0x25) [0x418875]   =================================       *** caught segfault ***   address 0x4d2001249d0, cause 'unknown'      Traceback:    1: StoPopProj(npred, inpc, LTres, asfr, migpred, inpc$MIGtype, mig.rate.code = inp$mig.rate.code[2], country.name = UNlocations[country.idx, "name"], keep.vital.events = keep.vital.events, annual = inp$annual)    2: predict.one.country(cidx, nr.traj, nr_project)    3: do.pop.predict(country.codes, inp, outdir, nr.traj, ages, pred = if (prediction.exist) pred else NULL, keep.vital.events = keep.vital.events, fixed.mx = inp$fixed.mx, fixed.pasfr = fixed.pasfr, function.inputs = inputs, verbose = verbose, ...)    4: pop.predict(countries = c(528, 218, 450, 242, 458), nr.traj = 3, verbose = FALSE, output.dir = sim.dir, parallel = parallel)    5: test.expressions()   An irrecoverable exception occurred. R is aborting now ...
• checking PDF version of manual ... [11s/29s] OK
• checking HTML version of manual ... [5s/12s] OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 1 ERROR