* installing *source* package ‘ashr’ ...
** this is package ‘ashr’ version ‘2.2-63’
** package ‘ashr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/ashr/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c MixSquarem.cpp -o MixSquarem.o
MixSquarem.cpp: In function ‘Rcpp::List squarem1(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::List)’:
MixSquarem.cpp:65:56: warning: ‘alpha’ may be used uninitialized [-Wmaybe-uninitialized]
   65 |     double sr2_scalar,sq2_scalar,sv2_scalar,srv_scalar,alpha,stepmin,stepmax;
      |                                                        ^~~~~
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o ashr.so MixSquarem.o RcppExports.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/ashr/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/ashr/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/ashr/src'
installing to /data/gannet/ripley/R/packages/tests-devel/ashr.Rcheck/00LOCK-ashr/00new/ashr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ashr)