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cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/linkutils.cpp.o -MF CMakeFiles/salalib.dir/linkutils.cpp.o.d -o CMakeFiles/salalib.dir/linkutils.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/linkutils.cpp
[ 58%] Building CXX object salalib/CMakeFiles/salalib.dir/gridproperties.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/gridproperties.cpp.o -MF CMakeFiles/salalib.dir/gridproperties.cpp.o.d -o CMakeFiles/salalib.dir/gridproperties.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/gridproperties.cpp
[ 58%] Building CXX object salalib/CMakeFiles/salalib.dir/attributetable.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/attributetable.cpp.o -MF CMakeFiles/salalib.dir/attributetable.cpp.o.d -o CMakeFiles/salalib.dir/attributetable.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/attributetable.cpp
[ 59%] Building CXX object salalib/CMakeFiles/salalib.dir/layermanagerimpl.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/layermanagerimpl.cpp.o -MF CMakeFiles/salalib.dir/layermanagerimpl.cpp.o.d -o CMakeFiles/salalib.dir/layermanagerimpl.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/layermanagerimpl.cpp
[ 60%] Building CXX object salalib/CMakeFiles/salalib.dir/attributetableview.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/attributetableview.cpp.o -MF CMakeFiles/salalib.dir/attributetableview.cpp.o.d -o CMakeFiles/salalib.dir/attributetableview.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/attributetableview.cpp
[ 60%] Building CXX object salalib/CMakeFiles/salalib.dir/geometrygenerators.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/geometrygenerators.cpp.o -MF CMakeFiles/salalib.dir/geometrygenerators.cpp.o.d -o CMakeFiles/salalib.dir/geometrygenerators.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/geometrygenerators.cpp
[ 61%] Building CXX object salalib/CMakeFiles/salalib.dir/point.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/point.cpp.o -MF CMakeFiles/salalib.dir/point.cpp.o.d -o CMakeFiles/salalib.dir/point.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/point.cpp
[ 62%] Building CXX object salalib/CMakeFiles/salalib.dir/pafcolor.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/pafcolor.cpp.o -MF CMakeFiles/salalib.dir/pafcolor.cpp.o.d -o CMakeFiles/salalib.dir/pafcolor.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/pafcolor.cpp
[ 62%] Building CXX object salalib/CMakeFiles/salalib.dir/alllinemap.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/alllinemap.cpp.o -MF CMakeFiles/salalib.dir/alllinemap.cpp.o.d -o CMakeFiles/salalib.dir/alllinemap.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/alllinemap.cpp
[ 63%] Building CXX object salalib/CMakeFiles/salalib.dir/axialminimiser.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/axialminimiser.cpp.o -MF CMakeFiles/salalib.dir/axialminimiser.cpp.o.d -o CMakeFiles/salalib.dir/axialminimiser.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/axialminimiser.cpp
[ 64%] Building CXX object salalib/CMakeFiles/salalib.dir/axialpolygons.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/axialpolygons.cpp.o -MF CMakeFiles/salalib.dir/axialpolygons.cpp.o.d -o CMakeFiles/salalib.dir/axialpolygons.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/axialpolygons.cpp
[ 64%] Building CXX object salalib/CMakeFiles/salalib.dir/tidylines.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/tidylines.cpp.o -MF CMakeFiles/salalib.dir/tidylines.cpp.o.d -o CMakeFiles/salalib.dir/tidylines.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/tidylines.cpp
[ 65%] Building CXX object salalib/CMakeFiles/salalib.dir/mapconverter.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/mapconverter.cpp.o -MF CMakeFiles/salalib.dir/mapconverter.cpp.o.d -o CMakeFiles/salalib.dir/mapconverter.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/mapconverter.cpp
[ 66%] Building CXX object salalib/CMakeFiles/salalib.dir/importutils.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/importutils.cpp.o -MF CMakeFiles/salalib.dir/importutils.cpp.o.d -o CMakeFiles/salalib.dir/importutils.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/importutils.cpp
[ 66%] Building CXX object salalib/CMakeFiles/salalib.dir/attributetableindex.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/attributetableindex.cpp.o -MF CMakeFiles/salalib.dir/attributetableindex.cpp.o.d -o CMakeFiles/salalib.dir/attributetableindex.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/attributetableindex.cpp
[ 67%] Building CXX object salalib/CMakeFiles/salalib.dir/salashape.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/salashape.cpp.o -MF CMakeFiles/salalib.dir/salashape.cpp.o.d -o CMakeFiles/salalib.dir/salashape.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/salashape.cpp
[ 67%] Building CXX object salalib/CMakeFiles/salalib.dir/shapemapgroupdata.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/shapemapgroupdata.cpp.o -MF CMakeFiles/salalib.dir/shapemapgroupdata.cpp.o.d -o CMakeFiles/salalib.dir/shapemapgroupdata.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/shapemapgroupdata.cpp
[ 68%] Building CXX object salalib/CMakeFiles/salalib.dir/pushvalues.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/pushvalues.cpp.o -MF CMakeFiles/salalib.dir/pushvalues.cpp.o.d -o CMakeFiles/salalib.dir/pushvalues.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/pushvalues.cpp
[ 69%] Building CXX object salalib/CMakeFiles/salalib.dir/exportutils.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/exportutils.cpp.o -MF CMakeFiles/salalib.dir/exportutils.cpp.o.d -o CMakeFiles/salalib.dir/exportutils.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/exportutils.cpp
[ 69%] Building CXX object salalib/CMakeFiles/salalib.dir/genlib/bsptree.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/genlib/bsptree.cpp.o -MF CMakeFiles/salalib.dir/genlib/bsptree.cpp.o.d -o CMakeFiles/salalib.dir/genlib/bsptree.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/genlib/bsptree.cpp
[ 70%] Building CXX object salalib/CMakeFiles/salalib.dir/genlib/p2dpoly.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/genlib/p2dpoly.cpp.o -MF CMakeFiles/salalib.dir/genlib/p2dpoly.cpp.o.d -o CMakeFiles/salalib.dir/genlib/p2dpoly.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/genlib/p2dpoly.cpp
[ 71%] Building CXX object salalib/CMakeFiles/salalib.dir/genlib/pafmath.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/genlib/pafmath.cpp.o -MF CMakeFiles/salalib.dir/genlib/pafmath.cpp.o.d -o CMakeFiles/salalib.dir/genlib/pafmath.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/genlib/pafmath.cpp
[ 71%] Building CXX object salalib/CMakeFiles/salalib.dir/genlib/stringutils.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/genlib/stringutils.cpp.o -MF CMakeFiles/salalib.dir/genlib/stringutils.cpp.o.d -o CMakeFiles/salalib.dir/genlib/stringutils.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/genlib/stringutils.cpp
[ 72%] Building CXX object salalib/CMakeFiles/salalib.dir/genlib/xmlparse.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/genlib/xmlparse.cpp.o -MF CMakeFiles/salalib.dir/genlib/xmlparse.cpp.o.d -o CMakeFiles/salalib.dir/genlib/xmlparse.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/genlib/xmlparse.cpp
[ 73%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaisovist.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgaisovist.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgaisovist.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgaisovist.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgaisovist.cpp
[ 73%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaangular.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgaangular.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgaangular.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgaangular.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgaangular.cpp
[ 74%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgametric.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgametric.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgametric.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgametric.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgametric.cpp
[ 75%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgathroughvision.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgathroughvision.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgathroughvision.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgathroughvision.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgathroughvision.cpp
[ 75%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisuallocal.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgavisuallocal.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgavisuallocal.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgavisuallocal.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgavisuallocal.cpp
[ 76%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobal.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobal.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgavisualglobal.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgavisualglobal.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgavisualglobal.cpp
[ 76%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaangulardepth.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgaangulardepth.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgaangulardepth.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgaangulardepth.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgaangulardepth.cpp
[ 77%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgametricdepth.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgametricdepth.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgametricdepth.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgametricdepth.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgametricdepth.cpp
[ 78%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobaldepth.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobaldepth.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgavisualglobaldepth.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgavisualglobaldepth.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgavisualglobaldepth.cpp
[ 78%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaangularopenmp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgaangularopenmp.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgaangularopenmp.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgaangularopenmp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgaangularopenmp.cpp
[ 79%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgametricopenmp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgametricopenmp.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgametricopenmp.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgametricopenmp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgametricopenmp.cpp
[ 80%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobalopenmp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualglobalopenmp.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgavisualglobalopenmp.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgavisualglobalopenmp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgavisualglobalopenmp.cpp
[ 80%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisuallocaladjmatrix.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/vgavisuallocaladjmatrix.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/vgavisuallocaladjmatrix.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/vgavisuallocaladjmatrix.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/vgavisuallocaladjmatrix.cpp
[ 81%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisuallocalopenmp.cpp.o
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[ 82%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgavisualshortestpath.cpp.o
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[ 83%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgametricshortestpath.cpp.o
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[ 83%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgametricdepthlinkcost.cpp.o
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[ 84%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaisovistzone.cpp.o
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[ 85%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/vgaangularshortestpath.cpp.o
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[ 85%] Building CXX object salalib/CMakeFiles/salalib.dir/vgamodules/extractlinkdata.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/vgamodules/extractlinkdata.cpp.o -MF CMakeFiles/salalib.dir/vgamodules/extractlinkdata.cpp.o.d -o CMakeFiles/salalib.dir/vgamodules/extractlinkdata.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/vgamodules/extractlinkdata.cpp
[ 86%] Building CXX object salalib/CMakeFiles/salalib.dir/axialmodules/axialintegration.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/axialmodules/axialintegration.cpp.o -MF CMakeFiles/salalib.dir/axialmodules/axialintegration.cpp.o.d -o CMakeFiles/salalib.dir/axialmodules/axialintegration.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/axialmodules/axialintegration.cpp
[ 87%] Building CXX object salalib/CMakeFiles/salalib.dir/axialmodules/axiallocal.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/axialmodules/axiallocal.cpp.o -MF CMakeFiles/salalib.dir/axialmodules/axiallocal.cpp.o.d -o CMakeFiles/salalib.dir/axialmodules/axiallocal.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/axialmodules/axiallocal.cpp
[ 87%] Building CXX object salalib/CMakeFiles/salalib.dir/axialmodules/axialstepdepth.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/axialmodules/axialstepdepth.cpp.o -MF CMakeFiles/salalib.dir/axialmodules/axialstepdepth.cpp.o.d -o CMakeFiles/salalib.dir/axialmodules/axialstepdepth.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/axialmodules/axialstepdepth.cpp
[ 88%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmangular.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmangular.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmangular.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmangular.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmangular.cpp
[ 89%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmmetric.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmmetric.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmmetric.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmmetric.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmmetric.cpp
[ 89%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtopological.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtopological.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtopological.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtopological.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtopological.cpp
[ 90%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtulip.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtulip.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtulip.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtulip.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtulip.cpp
[ 91%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtopologicalpd.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtopologicalpd.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtopologicalpd.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtopologicalpd.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtopologicalpd.cpp
[ 91%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmmetricpd.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmmetricpd.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmmetricpd.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmmetricpd.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmmetricpd.cpp
[ 92%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtulipdepth.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtulipdepth.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtulipdepth.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtulipdepth.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtulipdepth.cpp
[ 92%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmmetricshortestpath.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmmetricshortestpath.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmmetricshortestpath.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmmetricshortestpath.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmmetricshortestpath.cpp
[ 93%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtopologicalshortestpath.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtopologicalshortestpath.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtopologicalshortestpath.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtopologicalshortestpath.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtopologicalshortestpath.cpp
[ 94%] Building CXX object salalib/CMakeFiles/salalib.dir/segmmodules/segmtulipshortestpath.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/segmmodules/segmtulipshortestpath.cpp.o -MF CMakeFiles/salalib.dir/segmmodules/segmtulipshortestpath.cpp.o.d -o CMakeFiles/salalib.dir/segmmodules/segmtulipshortestpath.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/segmmodules/segmtulipshortestpath.cpp
[ 94%] Building CXX object salalib/CMakeFiles/salalib.dir/parsers/ntfp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/parsers/ntfp.cpp.o -MF CMakeFiles/salalib.dir/parsers/ntfp.cpp.o.d -o CMakeFiles/salalib.dir/parsers/ntfp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/parsers/ntfp.cpp
[ 95%] Building CXX object salalib/CMakeFiles/salalib.dir/parsers/dxfp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/parsers/dxfp.cpp.o -MF CMakeFiles/salalib.dir/parsers/dxfp.cpp.o.d -o CMakeFiles/salalib.dir/parsers/dxfp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/parsers/dxfp.cpp
[ 96%] Building CXX object salalib/CMakeFiles/salalib.dir/parsers/mapinfodata.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/parsers/mapinfodata.cpp.o -MF CMakeFiles/salalib.dir/parsers/mapinfodata.cpp.o.d -o CMakeFiles/salalib.dir/parsers/mapinfodata.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/parsers/mapinfodata.cpp
[ 96%] Building CXX object salalib/CMakeFiles/salalib.dir/parsers/tigerp.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/parsers/tigerp.cpp.o -MF CMakeFiles/salalib.dir/parsers/tigerp.cpp.o.d -o CMakeFiles/salalib.dir/parsers/tigerp.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/parsers/tigerp.cpp
[ 97%] Building CXX object salalib/CMakeFiles/salalib.dir/agents/agent.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/agents/agent.cpp.o -MF CMakeFiles/salalib.dir/agents/agent.cpp.o.d -o CMakeFiles/salalib.dir/agents/agent.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/agents/agent.cpp
[ 98%] Building CXX object salalib/CMakeFiles/salalib.dir/agents/agentprogram.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/agents/agentprogram.cpp.o -MF CMakeFiles/salalib.dir/agents/agentprogram.cpp.o.d -o CMakeFiles/salalib.dir/agents/agentprogram.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/agents/agentprogram.cpp
[ 98%] Building CXX object salalib/CMakeFiles/salalib.dir/agents/agentga.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/agents/agentga.cpp.o -MF CMakeFiles/salalib.dir/agents/agentga.cpp.o.d -o CMakeFiles/salalib.dir/agents/agentga.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/agents/agentga.cpp
[ 99%] Building CXX object salalib/CMakeFiles/salalib.dir/agents/agentanalysis.cpp.o
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/local/bin/g++-14  -std=gnu++17 -DSALALIB_LIBRARY -D_DEPTHMAP -D_USE_MATH_DEFINES -I/data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/. -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -O3 -DNDEBUG -std=gnu++17 -fPIC -Wall -Wextra -fopenmp -MD -MT salalib/CMakeFiles/salalib.dir/agents/agentanalysis.cpp.o -MF CMakeFiles/salalib.dir/agents/agentanalysis.cpp.o.d -o CMakeFiles/salalib.dir/agents/agentanalysis.cpp.o -c /data/gannet/ripley/R/packages/tests-devel/alcyon/src/libs/salalib/agents/agentanalysis.cpp
[100%] Linking CXX static library libsalalib.a
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/bin/cmake -P CMakeFiles/salalib.dir/cmake_clean_target.cmake
cd /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/salalib && /usr/bin/cmake -E cmake_link_script CMakeFiles/salalib.dir/link.txt --verbose=1
/usr/bin/ar qc libsalalib.a CMakeFiles/salalib.dir/shapegraph.cpp.o CMakeFiles/salalib.dir/connector.cpp.o CMakeFiles/salalib.dir/isovist.cpp.o CMakeFiles/salalib.dir/metagraphreadwrite.cpp.o CMakeFiles/salalib.dir/ngraph.cpp.o CMakeFiles/salalib.dir/pointmap.cpp.o CMakeFiles/salalib.dir/salaprogram.cpp.o CMakeFiles/salalib.dir/shapemap.cpp.o CMakeFiles/salalib.dir/spacepix.cpp.o CMakeFiles/salalib.dir/sparksieve2.cpp.o CMakeFiles/salalib.dir/entityparsing.cpp.o CMakeFiles/salalib.dir/linkutils.cpp.o CMakeFiles/salalib.dir/gridproperties.cpp.o CMakeFiles/salalib.dir/attributetable.cpp.o CMakeFiles/salalib.dir/layermanagerimpl.cpp.o CMakeFiles/salalib.dir/attributetableview.cpp.o CMakeFiles/salalib.dir/geometrygenerators.cpp.o CMakeFiles/salalib.dir/point.cpp.o CMakeFiles/salalib.dir/pafcolor.cpp.o CMakeFiles/salalib.dir/alllinemap.cpp.o CMakeFiles/salalib.dir/axialminimiser.cpp.o CMakeFiles/salalib.dir/axialpolygons.cpp.o CMakeFiles/salalib.dir/tidylines.cpp.o CMakeFiles/salalib.dir/mapconverter.cpp.o CMakeFiles/salalib.dir/importutils.cpp.o CMakeFiles/salalib.dir/attributetableindex.cpp.o CMakeFiles/salalib.dir/salashape.cpp.o CMakeFiles/salalib.dir/shapemapgroupdata.cpp.o CMakeFiles/salalib.dir/pushvalues.cpp.o CMakeFiles/salalib.dir/exportutils.cpp.o CMakeFiles/salalib.dir/genlib/bsptree.cpp.o CMakeFiles/salalib.dir/genlib/p2dpoly.cpp.o CMakeFiles/salalib.dir/genlib/pafmath.cpp.o CMakeFiles/salalib.dir/genlib/stringutils.cpp.o CMakeFiles/salalib.dir/genlib/xmlparse.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaisovist.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaangular.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametric.cpp.o CMakeFiles/salalib.dir/vgamodules/vgathroughvision.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisuallocal.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisualglobal.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaangulardepth.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametricdepth.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisualglobaldepth.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaangularopenmp.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametricopenmp.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisualglobalopenmp.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisuallocaladjmatrix.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisuallocalopenmp.cpp.o CMakeFiles/salalib.dir/vgamodules/vgavisualshortestpath.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametricshortestpathtomany.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametricshortestpath.cpp.o CMakeFiles/salalib.dir/vgamodules/vgametricdepthlinkcost.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaisovistzone.cpp.o CMakeFiles/salalib.dir/vgamodules/vgaangularshortestpath.cpp.o CMakeFiles/salalib.dir/vgamodules/extractlinkdata.cpp.o CMakeFiles/salalib.dir/axialmodules/axialintegration.cpp.o CMakeFiles/salalib.dir/axialmodules/axiallocal.cpp.o CMakeFiles/salalib.dir/axialmodules/axialstepdepth.cpp.o CMakeFiles/salalib.dir/segmmodules/segmangular.cpp.o CMakeFiles/salalib.dir/segmmodules/segmmetric.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtopological.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtulip.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtopologicalpd.cpp.o CMakeFiles/salalib.dir/segmmodules/segmmetricpd.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtulipdepth.cpp.o CMakeFiles/salalib.dir/segmmodules/segmmetricshortestpath.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtopologicalshortestpath.cpp.o CMakeFiles/salalib.dir/segmmodules/segmtulipshortestpath.cpp.o CMakeFiles/salalib.dir/parsers/ntfp.cpp.o CMakeFiles/salalib.dir/parsers/dxfp.cpp.o CMakeFiles/salalib.dir/parsers/mapinfodata.cpp.o CMakeFiles/salalib.dir/parsers/tigerp.cpp.o CMakeFiles/salalib.dir/agents/agent.cpp.o CMakeFiles/salalib.dir/agents/agentprogram.cpp.o CMakeFiles/salalib.dir/agents/agentga.cpp.o CMakeFiles/salalib.dir/agents/agentanalysis.cpp.o
/usr/bin/ranlib libsalalib.a
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release'
[100%] Built target salalib
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release'
/usr/bin/cmake -E cmake_progress_start /data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release/CMakeFiles 0
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src/build-Release'
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
using C++17
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c main.cpp -o build-Release/main.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c communicator.cpp -o build-Release/communicator.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c rcpp_ShapeMap.cpp -o build-Release/rcpp_ShapeMap.o
rcpp_ShapeMap.cpp: In function 'std::vector<std::__cxx11::basic_string<char> > getShapeMapAttributeNames(ShapeMap*)':
rcpp_ShapeMap.cpp:28:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
   28 |     for (int i = 0; i < attributes.getNumColumns(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
rcpp_ShapeMap.cpp: In function 'Rcpp::GenericVector getShapesAsPolylineCoords(Rcpp::XPtr<ShapeMap>)':
rcpp_ShapeMap.cpp:122:21: warning: unused variable 'firstPoint' [-Wunused-variable]
  122 |         const auto &firstPoint = *shape.second.points.begin();
      |                     ^~~~~~~~~~
rcpp_ShapeMap.cpp:123:21: warning: unused variable 'lastPoint' [-Wunused-variable]
  123 |         const auto &lastPoint = *shape.second.points.rbegin();
      |                     ^~~~~~~~~
rcpp_ShapeMap.cpp:114:11: warning: unused variable 'TOLERANCE' [-Wunused-variable]
  114 |     float TOLERANCE = 0.0001;
      |           ^~~~~~~~~
rcpp_ShapeMap.cpp: In function 'Rcpp::List getShapeAttributes(Rcpp::XPtr<ShapeMap>, int)':
rcpp_ShapeMap.cpp:184:31: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  184 |         for (int col = 0; col < attributes.getNumColumns(); ++col) {
      |                           ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
rcpp_ShapeMap.cpp:179:11: warning: unused variable 'TOLERANCE' [-Wunused-variable]
  179 |     float TOLERANCE = 0.0001;
      |           ^~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c rcpp_ShapeGraph.cpp -o build-Release/rcpp_ShapeGraph.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c rcpp_AllLineMap.cpp -o build-Release/rcpp_AllLineMap.o
rcpp_ShapeGraph.cpp: In function 'std::map<std::__cxx11::basic_string<char>, std::vector<int> > getAxialConnections(Rcpp::XPtr<ShapeMap>)':
rcpp_ShapeGraph.cpp:17:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Connector>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   17 |     for (int i = 0; i < connectors.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c rcpp_PointMap.cpp -o build-Release/rcpp_PointMap.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c rcpp_metagraphdata.cpp -o build-Release/rcpp_metagraphdata.o
rcpp_PointMap.cpp: In function 'Rcpp::NumericMatrix getGridCoordinates(Rcpp::XPtr<PointMap>)':
rcpp_PointMap.cpp:219:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  219 |     for (int i = 0; i < pointMapPtr->getRows(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp:220:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  220 |         for (int j = 0; j < pointMapPtr->getCols(); j++) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp: In function 'std::vector<std::__cxx11::basic_string<char> > getPointMapAttributeNames(PointMap*)':
rcpp_PointMap.cpp:240:23: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  240 |     for (int i = 0; i < attributes.getNumColumns(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp: In function 'std::map<std::__cxx11::basic_string<char>, std::vector<double> > getPointMapAttributeData(Rcpp::XPtr<PointMap>, std::vector<std::__cxx11::basic_string<char> >)':
rcpp_PointMap.cpp:260:31: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |             for (int i = 0; i < pointMap->getRows(); i++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp:261:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  261 |                 for (int j = 0; j < pointMap->getCols(); j++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp:274:31: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  274 |             for (int i = 0; i < pointMap->getRows(); i++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp:275:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  275 |                 for (int j = 0; j < pointMap->getCols(); j++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp: In function 'std::map<std::__cxx11::basic_string<char>, std::vector<double> > getPointMapPropertyData(Rcpp::XPtr<PointMap>, std::vector<std::__cxx11::basic_string<char> >)':
rcpp_PointMap.cpp:307:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  307 |         for (int i = 0; i < pointMap->getRows(); i++) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
rcpp_PointMap.cpp:308:31: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  308 |             for (int j = 0; j < pointMap->getCols(); j++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c process_convertInternal.cpp -o build-Release/process_convertInternal.o
process_convertInternal.cpp: In function 'Rcpp::List shapeMapToSegment(Rcpp::XPtr<ShapeMap>, Rcpp::Nullable<std::__cxx11::basic_string<char> >, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>)':
process_convertInternal.cpp:78:10: warning: unused variable 'keeporiginal' [-Wunused-variable]
   78 |     auto keeporiginal = NullableValue::get(keeporiginalNV, true);
      |          ^~~~~~~~~~~~
process_convertInternal.cpp:82:10: warning: unused variable 'converted' [-Wunused-variable]
   82 |     bool converted = true;
      |          ^~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c process_convertExternal.cpp -o build-Release/process_convertExternal.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c process_link.cpp -o build-Release/process_link.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c process_isovist.cpp -o build-Release/process_isovist.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_axial.cpp -o build-Release/analysis_axial.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_segment.cpp -o build-Release/analysis_segment.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_segmentDepth.cpp -o build-Release/analysis_segmentDepth.o
analysis_axial.cpp: In lambda function:
analysis_axial.cpp:55:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
   55 |                 for (int i = 0; i < table.getNumColumns(); i++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~
analysis_axial.cpp: In lambda function:
analysis_axial.cpp:121:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  121 |             for (int i = 0; i < stepDepthPointsX.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~
analysis_segment.cpp: In lambda function:
analysis_segment.cpp:64:35: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
   64 |                 for (int i = 0; i < table.getNumColumns(); i++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~
analysis_segment.cpp: In function 'Rcpp::List runSegmentAnalysis(Rcpp::XPtr<ShapeGraph>, Rcpp::NumericVector, int, int, Rcpp::Nullable<std::__cxx11::basic_string<char> >, Rcpp::Nullable<bool>, Rcpp::Nullable<int>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>)':
analysis_segment.cpp:38:10: warning: unused variable 'selOnly' [-Wunused-variable]
   38 |     auto selOnly = NullableValue::get(selOnlyNV, false);
      |          ^~~~~~~
analysis_segmentDepth.cpp: In lambda function:
analysis_segmentDepth.cpp:46:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   46 |             for (int i = 0; i < stepDepthPointsX.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_segmentShortestPath.cpp -o build-Release/analysis_segmentShortestPath.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_allFewest.cpp -o build-Release/analysis_allFewest.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_vgaGlobal.cpp -o build-Release/analysis_vgaGlobal.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_vgaLocal.cpp -o build-Release/analysis_vgaLocal.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_vgaIsovist.cpp -o build-Release/analysis_vgaIsovist.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_vgaDepth.cpp -o build-Release/analysis_vgaDepth.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_vgaShortestPath.cpp -o build-Release/analysis_vgaShortestPath.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c analysis_agent.cpp -o build-Release/analysis_agent.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I../src/libs -I../../inst/include/ -I.. -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/cli/include' -I/usr/local/include   -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o build-Release/RcppExports.o
analysis_vgaShortestPath.cpp: In function 'Rcpp::List vgaVisualShortestPath(Rcpp::XPtr<PointMap>, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>)':
analysis_vgaShortestPath.cpp:25:10: warning: unused variable 'verbose' [-Wunused-variable]
   25 |     auto verbose = NullableValue::get(verboseNV, false);
      |          ^~~~~~~
analysis_vgaShortestPath.cpp: In function 'Rcpp::List vgaMetricShortestPath(Rcpp::XPtr<PointMap>, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>)':
analysis_vgaShortestPath.cpp:89:10: warning: unused variable 'verbose' [-Wunused-variable]
   89 |     auto verbose = NullableValue::get(verboseNV, false);
      |          ^~~~~~~
analysis_vgaShortestPath.cpp: In function 'Rcpp::List vgaAngularShortestPath(Rcpp::XPtr<PointMap>, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>, Rcpp::Nullable<bool>)':
analysis_vgaShortestPath.cpp:153:10: warning: unused variable 'verbose' [-Wunused-variable]
  153 |     auto verbose = NullableValue::get(verboseNV, false);
      |          ^~~~~~~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o alcyon.so build-Release/main.o build-Release/communicator.o build-Release/rcpp_ShapeMap.o build-Release/rcpp_ShapeGraph.o build-Release/rcpp_AllLineMap.o build-Release/rcpp_PointMap.o build-Release/rcpp_metagraphdata.o build-Release/process_convertInternal.o build-Release/process_convertExternal.o build-Release/process_link.o build-Release/process_isovist.o build-Release/analysis_axial.o build-Release/analysis_segment.o build-Release/analysis_segmentDepth.o build-Release/analysis_segmentShortestPath.o build-Release/analysis_allFewest.o build-Release/analysis_vgaGlobal.o build-Release/analysis_vgaLocal.o build-Release/analysis_vgaIsovist.o build-Release/analysis_vgaDepth.o build-Release/analysis_vgaShortestPath.o build-Release/analysis_agent.o build-Release/RcppExports.o -fopenmp build-Release/libalcyon_gensala.a
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/alcyon/src'
installing to /data/gannet/ripley/R/packages/tests-devel/alcyon.Rcheck/00LOCK-alcyon/00new/alcyon/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (alcyon)