* installing *source* package ‘UniExactFunTest’ ...
** package ‘UniExactFunTest’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/UniExactFunTest/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c UEFT.cpp -o UEFT.o
UEFT.cpp: In function 'double getUniEFT(std::vector<std::vector<int> >, bool, bool, bool)':
UEFT.cpp:31:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
31 | for (int i = 0; i < r; i++)
| ~~^~~
UEFT.cpp:33:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
33 | for (int j = 0; j < s; j++)
| ~~^~~
UEFT.cpp:40:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
40 | valueForFac = (r > N ? r : N);
| ~~^~~
UEFT.cpp:41:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
41 | valueForFac = (s > valueForFac ? s : valueForFac);
| ~~^~~~~~~~~~~~~
UEFT.cpp:45:10: warning: unused variable 'oriChi' [-Wunused-variable]
45 | double oriChi;
| ^~~~~~
UEFT.cpp: In function 'double getUniEFTC(const std::vector<std::vector<int> >&, bool)':
UEFT.cpp:108:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
108 | for (int i = 0; i < r; i++)
| ~~^~~
UEFT.cpp:110:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
110 | for (int j = 0; j < s; j++)
| ~~^~~
UEFT.cpp:137:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
137 | valueForFac = (r > N ? r : N);
| ~~^~~
UEFT.cpp:138:20: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
138 | valueForFac = (s > valueForFac ? s : valueForFac);
| ~~^~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c fastEnu.cpp -o fastEnu.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c fastEnuNode.cpp -o fastEnuNode.o
fastEnu.cpp: In function 'double fastEnu::MFTNetwork(std::vector<int>, std::vector<int>, int, double, const std::vector<double>&, bool)':
fastEnu.cpp:1312:28: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1312 | for (unsigned i = 0; i < ncols; i++)
| ~~^~~~~~~
fastEnuNode.cpp: In member function 'void fastEnuNode::addPastLen(double, double)':
fastEnuNode.cpp:97:16: warning: unused variable 'j' [-Wunused-variable]
97 | size_t j = 0;
| ^
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c main.cpp -o main.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0 -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c matrixTools.cpp -o matrixTools.o
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o UniExactFunTest.so RcppExports.o UEFT.o fastEnu.o fastEnuNode.o main.o matrixTools.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/UniExactFunTest/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/UniExactFunTest/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/UniExactFunTest/src'
installing to /data/gannet/ripley/R/packages/tests-devel/UniExactFunTest.Rcheck/00LOCK-UniExactFunTest/00new/UniExactFunTest/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (UniExactFunTest)