* using log directory ‘/data/gannet/ripley/R/packages/tests-devel/TukeyC.Rcheck’ * using R Under development (unstable) (2025-02-14 r87716) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘TukeyC/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘TukeyC’ version ‘1.3-42’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘TukeyC’ can be installed ... [18s/23s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-gcc/TukeyC-00install.html' for details. * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [26s/35s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in ‘TukeyC-Ex.R’ failed The error most likely occurred in: > ### Name: TukeyC > ### Title: The TukeyC Test for Single Experiments > ### Aliases: TukeyC TukeyC.default TukeyC.lm TukeyC.formula TukeyC.aovlist > ### TukeyC.lmerMod > ### Keywords: package > > ### ** Examples > > ## > ## Examples:Randomized Complete Block Design (RCBD) > ## More details: demo(package='TukeyC') > ## > > ## The parameters can be: formula, aov, lm, aovlist and lmerMod > > data(RCBD) > > ## From: formula > tk1 <- with(RCBD, + TukeyC(y ~ blk + tra, + data=dfm, + which='tra')) Error in data.frame(means = aux_mt1, reps = reps) : arguments imply differing number of rows: 0, 5 Calls: with ... TukeyC.formula -> TukeyC -> TukeyC.lm -> data.frame Execution halted * checking PDF version of manual ... [9s/13s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR