- using R Under development (unstable) (2024-11-07 r87302)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘TraMineRextras/DESCRIPTION’ ... OK
- this is package ‘TraMineRextras’ version ‘0.6.8’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘TraMineRextras’ can be installed ... [20s/28s] OK
See the install log for details.
- used C compiler: ‘gcc-14 (GCC) 14.2.0’
- used C++ compiler: ‘g++-14 (GCC) 14.2.0’
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking whether startup messages can be suppressed ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [35s/45s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... ERROR
Running examples in ‘TraMineRextras-Ex.R’ failed
The error most likely occurred in:
> ### Name: FCE_to_TSE
> ### Title: Data conversion from Fixed Column Event format to TSE.
> ### Aliases: FCE_to_TSE
> ### Keywords: data format
>
> ### ** Examples
>
> ## Generate a ramdom data set
> fce <- data.frame(id=1:100, event1=runif(100), event2=runif(100))
>
> ## Add missing values (ie non-occurrences)
> fce[runif(100)<0.1, "event1"] <- NA
> fce[runif(100)<0.1, "event2"] <- NA
>
> tse <- FCE_to_TSE(fce, id="id", cols=c("event1", "event2"),
+ eventlist=c("Marriage", "Child birth"), firstEvent="Birth")
>
> seq <- seqecreate(tse)
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: seqecreate.internal(data = data, id = id, timestamp = timestamp, event = event, end.event = end.event, tevent = tevent, use.labels = use.labels, order.before = FALSE, weighted = weighted)
2: seqecreate(tse)
An irrecoverable exception occurred. R is aborting now ...
- checking PDF version of manual ... [13s/19s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 ERROR