* installing *source* package ‘TMB’ ...
** package ‘TMB’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/TMB/src'
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c external_metis.c -o external_metis.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c init.c -o init.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c local_stubs.c -o local_stubs.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c solve_subset.c -o solve_subset.o
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c utils.c -o utils.o
gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o TMB.so external_metis.o init.o local_stubs.o solve_subset.o utils.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/TMB/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/TMB/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/TMB/src'
installing to /data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
Building example simple 
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/examples'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I"/data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/include" -I""  -DTMB_SAFEBOUNDS  -DLIB_UNLOAD=R_unload_simple  -DTMB_LIB_INIT=R_init_simple  -DCPPAD_FRAMEWORK -I'/data/gannet/ripley/R/R-devel/library/Matrix/include' -I'/data/gannet/ripley/R/test-dev/RcppEigen/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c simple.cpp -o simple.o
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o simple.so simple.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/examples'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/examples'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/TMB.Rcheck/00LOCK-TMB/00new/TMB/examples'
Build time 194.973 seconds

** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TMB)