* installing *source* package ‘SpatialEpi’ ...
** this is package ‘SpatialEpi’ version ‘1.2.8’
** package ‘SpatialEpi’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SpatialEpi/src'
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c bayes_cluster.cpp -o bayes_cluster.o
g++ -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection   -c cluster_detection.cpp -o cluster_detection.o
bayes_cluster.cpp: In function ‘Rcpp::List return_local_moves(Rcpp::NumericVector, Rcpp::List, Rcpp::NumericMatrix)’:
bayes_cluster.cpp:399:23: warning: ‘end’ may be used uninitialized [-Wmaybe-uninitialized]
  399 |     for(int z=start; z<end; z++){
      |                      ~^~~~
bayes_cluster.cpp:359:69: note: ‘end’ was declared here
  359 |   int k = theta.size(), n_zones = cluster_list.size(), zone, start, end, zone_sub,
      |                                                                     ^~~
bayes_cluster.cpp:399:23: warning: ‘start’ may be used uninitialized [-Wmaybe-uninitialized]
  399 |     for(int z=start; z<end; z++){
      |                      ~^~~~
bayes_cluster.cpp:359:62: note: ‘start’ was declared here
  359 |   int k = theta.size(), n_zones = cluster_list.size(), zone, start, end, zone_sub,
      |                                                              ^~~~~
g++ -std=gnu++17 -shared -L/usr/local/lib64 -o SpatialEpi.so RcppExports.o bayes_cluster.o cluster_detection.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SpatialEpi/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SpatialEpi/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SpatialEpi/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SpatialEpi.Rcheck/00LOCK-SpatialEpi/00new/SpatialEpi/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SpatialEpi)