- using R Under development (unstable) (2024-12-05 r87423)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘SK4FGA/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘SK4FGA’ version ‘0.1.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘SK4FGA’ can be installed ... [22s/25s] OK
See the install log for details.
- used C++ compiler: ‘g++-14 (GCC) 14.2.0’
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... NOTE
checkRd: (-1) glass.Rd:10: Lost braces
10 | \item{item}{factor}{200 levels - which item the measurements came from}
| ^
checkRd: (-1) glass.Rd:11-12: Lost braces
11 | \item{fragment}{factor}{4 levels - which of the four fragments from each item the observations were made
| ^
checkRd: (-1) glass.Rd:13: Lost braces
13 | \item{logNaO}{numeric}{log of sodium concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:14: Lost braces
14 | \item{logMgO}{numeric}{log of magnesium concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:15: Lost braces
15 | \item{logAlO}{numeric}{log of aluminium concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:16: Lost braces
16 | \item{logSiO}{numeric}{log of silicon concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:17: Lost braces
17 | \item{logKO}{numeric}{log of potassium concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:18: Lost braces
18 | \item{logCaO}{numeric}{log of calcium concentration to oxygen concentration}
| ^
checkRd: (-1) glass.Rd:19: Lost braces
19 | \item{logFeO}{numeric}{log of iron concentration to oxygen concentration}
| ^
checkRd: (-1) glass2.Rd:10: Lost braces
10 | \item{item}{factor}{761 levels - which item the measurements came from}
| ^
checkRd: (-1) glass2.Rd:11: Lost braces
11 | \item{Li7}{numeric}{log of lithium concentration}
| ^
checkRd: (-1) glass2.Rd:12: Lost braces
12 | \item{Mg25}{numeric}{log of magnesium concentration}
| ^
checkRd: (-1) glass2.Rd:13: Lost braces
13 | \item{Al27}{numeric}{log of aluminium concentration}
| ^
checkRd: (-1) glass2.Rd:14: Lost braces
14 | \item{K39}{numeric}{log of potassium concentration}
| ^
checkRd: (-1) glass2.Rd:15: Lost braces
15 | \item{Ti49}{numeric}{log of titanium concentration}
| ^
checkRd: (-1) glass2.Rd:16: Lost braces
16 | \item{Mn55}{numeric}{log of manganese concentration}
| ^
checkRd: (-1) glass2.Rd:17: Lost braces
17 | \item{Fe57}{numeric}{log of iron concentration}
| ^
checkRd: (-1) glass2.Rd:18: Lost braces
18 | \item{Rb85}{numeric}{log of rubidium concentration}
| ^
checkRd: (-1) glass2.Rd:19: Lost braces
19 | \item{Sr88}{numeric}{log of strontium concentration}
| ^
checkRd: (-1) glass2.Rd:20: Lost braces
20 | \item{Zr90}{numeric}{log of zirconium concentration}
| ^
checkRd: (-1) glass2.Rd:21: Lost braces
21 | \item{Ba137}{numeric}{log of barium concentration}
| ^
checkRd: (-1) glass2.Rd:22: Lost braces
22 | \item{La139}{numeric}{log of lanthanum concentration}
| ^
checkRd: (-1) glass2.Rd:23: Lost braces
23 | \item{Ce140}{numeric}{log of cerium concentration}
| ^
checkRd: (-1) glass2.Rd:24: Lost braces
24 | \item{Nd146}{numeric}{log of neodymium concentration}
| ^
checkRd: (-1) glass2.Rd:25: Lost braces
25 | \item{Pb208}{numeric}{log of lead concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:10: Lost braces
10 | \item{item}{factor}{761 levels - which item the measurements came from}
| ^
checkRd: (-1) vehicle.glass.Rd:11: Lost braces
11 | \item{Li7}{numeric}{log of lithium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:12: Lost braces
12 | \item{Mg25}{numeric}{log of magnesium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:13: Lost braces
13 | \item{Al27}{numeric}{log of aluminium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:14: Lost braces
14 | \item{K39}{numeric}{log of potassium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:15: Lost braces
15 | \item{Ti49}{numeric}{log of titanium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:16: Lost braces
16 | \item{Mn55}{numeric}{log of manganese concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:17: Lost braces
17 | \item{Fe57}{numeric}{log of iron concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:18: Lost braces
18 | \item{Rb85}{numeric}{log of rubidium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:19: Lost braces
19 | \item{Sr88}{numeric}{log of strontium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:20: Lost braces
20 | \item{Zr90}{numeric}{log of zirconium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:21: Lost braces
21 | \item{Ba137}{numeric}{log of barium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:22: Lost braces
22 | \item{La139}{numeric}{log of lanthanum concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:23: Lost braces
23 | \item{Ce140}{numeric}{log of cerium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:24: Lost braces
24 | \item{Nd146}{numeric}{log of neodymium concentration}
| ^
checkRd: (-1) vehicle.glass.Rd:25: Lost braces
25 | \item{Pb208}{numeric}{log of lead concentration}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... OK
- checking PDF version of manual ... [7s/12s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE