* installing *source* package ‘SCEPtERbinary’ ...
** package ‘SCEPtERbinary’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SCEPtERbinary/src'
gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes  -c lik4.c -o lik4.o
lik4.c: In function 'lik4bin':
lik4.c:88:29: warning: unused variable 'd4' [-Wunused-variable]
   88 |   DATA5 *d, *d1, *d2, *d3, *d4;
      |                             ^~
lik4.c:88:24: warning: unused variable 'd3' [-Wunused-variable]
   88 |   DATA5 *d, *d1, *d2, *d3, *d4;
      |                        ^~
lik4.c:86:68: warning: unused variable 'low' [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                                                    ^~~
lik4.c:86:64: warning: unused variable 'up' [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                                                ^~
lik4.c:86:39: warning: unused variable 'start' [-Wunused-variable]
   86 |   long i, j, nres, nres1, nres2, DIM, start, n, startT, stopT, up, low;
      |                                       ^~~~~
lik4.c:85:17: warning: unused variable 'sel' [-Wunused-variable]
   85 |   SEXP res, dm, sel;
      |                 ^~~
lik4.c:85:13: warning: unused variable 'dm' [-Wunused-variable]
   85 |   SEXP res, dm, sel;
      |             ^~
lik4.c:84:33: warning: unused variable 'time2' [-Wunused-variable]
   84 |   double sTeffP, sTeffM, time1, time2;
      |                                 ^~~~~
lik4.c:84:26: warning: unused variable 'time1' [-Wunused-variable]
   84 |   double sTeffP, sTeffM, time1, time2;
      |                          ^~~~~
lik4.c:80:14: warning: variable 'ncol' set but not used [-Wunused-but-set-variable]
   80 |   long nrow, ncol, count;
      |              ^~~~
lik4.c:79:43: warning: variable 'EXP' set but not used [-Wunused-but-set-variable]
   79 |   double Vthr, maxL, maxL1, maxL2, lmult, EXP, rpcage;
      |                                           ^~~
lik4.c:79:36: warning: variable 'lmult' set but not used [-Wunused-but-set-variable]
   79 |   double Vthr, maxL, maxL1, maxL2, lmult, EXP, rpcage;
      |                                    ^~~~~
gcc-14 -shared -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -fpic -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o SCEPtERbinary.so lik4.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SCEPtERbinary/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SCEPtERbinary/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SCEPtERbinary/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SCEPtERbinary.Rcheck/00LOCK-SCEPtERbinary/00new/SCEPtERbinary/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SCEPtERbinary)