* installing *source* package ‘SBMTrees’ ...
** package ‘SBMTrees’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (GCC) 14.2.0’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/R-devel/include -I../inst/include/ -I/data/gannet/ripley/R/R-devel/include/Rcpp -I/data/gannet/ripley/R/R-devel/include/RcppArmadillo -I/data/gannet/ripley/R/R-devel/include/RcppDist -I/data/gannet/ripley/R/R-devel/include/RcppProgress -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I/data/gannet/ripley/R/R-devel/include -I../inst/include/ -I/data/gannet/ripley/R/R-devel/include/Rcpp -I/data/gannet/ripley/R/R-devel/include/RcppArmadillo -I/data/gannet/ripley/R/R-devel/include/RcppDist -I/data/gannet/ripley/R/R-devel/include/RcppProgress -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I'/data/gannet/ripley/R/test-dev/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-dev/RcppDist/include' -I'/data/gannet/ripley/R/test-dev/RcppProgress/include' -I/usr/local/include -DC99_INLINE_SEMANTICS=0   -fpic  -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection  -DR_NO_REMAP -c sequential_imputation.cpp -o sequential_imputation.o
In file included from bart_model.h:44,
                 from bmtrees.h:44,
                 from sequential_imputation.cpp:22:
BART/bart.h: In member function 'void bart::makexinfo_bart(size_t, size_t, double*, xinfo&, int*)':
BART/bart.h:103:24: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  103 |        for(size_t j=0;j<nc[i];j++) xi[i][j] = minx[i] + (j+1)*xinc;
      |                       ~^~~~~~
bart_model.h: In constructor 'bart_model::bart_model(Rcpp::NumericMatrix, Rcpp::NumericVector, long int, bool, bool, bool, int, Rcpp::Nullable<double>, double, double, double, double)':
bart_model.h:143:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  143 |       for(size_t i=0;i<p;i++) {
      |                      ~^~
bart_model.h: In member function 'Rcpp::List bart_model::update(long int, long int, int, bool, long int)':
bart_model.h:199:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  199 |       for(size_t k=0;k<n;k++) {restemp=(iy[k]-bm.f(k)); rss += restemp*restemp;}
      |                      ~^~
bart_model.h:204:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  204 |         for(size_t k=0;k<n;k++) trmean[k]+=bm.f(k);
      |                        ~^~
bart_model.h:211:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  211 |           for(size_t j=0;j<ntrees;j++) {
      |                          ~^~~~~~~
bart_model.h:218:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  218 |           for(size_t j=0;j<p;j++){
      |                          ~^~
bart_model.h:236:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  236 |     for(size_t k=0;k<n;k++) trmean[k]/=npost;
      |                    ~^~
bart_model.h: In member function 'Rcpp::List bart_model::update(double, long int, long int, int, bool, long int)':
bart_model.h:294:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  294 |     for(size_t i=0;i< nburn + npost;i++) {
      |                    ~^~~~~~~~~~~~~~~
bart_model.h:308:11: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  308 |       if(i>=nburn) {
      |          ~^~~~~~~
bart_model.h:309:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  309 |         for(size_t k=0;k<n;k++) trmean[k]+=bm.f(k);
      |                        ~^~
bart_model.h:313:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  313 |           for(size_t k=0;k<n;k++) TRDRAW(trcnt,k)=bm.f(k);
      |                          ~^~
bart_model.h:315:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  315 |           for(size_t j=0;j<ntrees;j++) {
      |                          ~^~~~~~~
bart_model.h:322:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  322 |           for(size_t j=0;j<p;j++){
      |                          ~^~
bart_model.h:340:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
  340 |     for(size_t k=0;k<n;k++) trmean[k]/=npost;
      |                    ~^~
g++-14 -std=gnu++17 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o SBMTrees.so RcppExports.o sequential_imputation.o -llapack -L/data/gannet/ripley/R/R-devel/lib -lRblas -lgfortran -lm -lquadmath -L/data/gannet/ripley/R/R-devel/lib
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/SBMTrees/src'
installing to /data/gannet/ripley/R/packages/tests-devel/SBMTrees.Rcheck/00LOCK-SBMTrees/00new/SBMTrees/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SBMTrees)