* installing *source* package ‘RLRsim’ ... ** package ‘RLRsim’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (GCC) 14.2.0’ using C++ compiler: ‘g++-14 (GCC) 14.2.0’ using C++11 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RLRsim/src' g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RLRsim.cpp -o RLRsim.o g++-14 -std=gnu++11 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from /data/gannet/ripley/R/test-dev/Rcpp/include/RcppCommon.h:189, from /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp.h:27, from RLRsim.cpp:3: In function 'SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = double]', inlined from 'SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = double]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from 'SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = double]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = double]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from 'SEXPREC* Rcpp::wrap(const T&) [with T = double]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from 'static SEXPREC* Rcpp::internal::generic_element_converter<RTYPE>::get(const T&) [with T = double; int RTYPE = 19]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:532:13, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:525:46, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:514:34, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&) [with T = Rcpp::traits::named_object<double>; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1164:32, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; TArgs = {Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; TArgs = {Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Matrix<14> >; TArgs = {Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Matrix<14> >; TArgs = {Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Matrix<14> >; TArgs = {Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Vector<13> >; TArgs = {Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static void Rcpp::Vector<RTYPE, StoragePolicy>::replace_element_impl(iterator&, Rcpp::Shield<SEXPREC*>&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >; TArgs = {Rcpp::traits::named_object<Rcpp::Vector<13, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from 'static Rcpp::Vector<RTYPE, StoragePolicy> Rcpp::Vector<RTYPE, StoragePolicy>::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<13, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1148:37, inlined from 'static Rcpp::Vector<RTYPE, StoragePolicy> Rcpp::Vector<RTYPE, StoragePolicy>::create(const T& ...) [with T = {Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<13, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Matrix<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<Rcpp::Vector<14, Rcpp::PreserveStorage> >, Rcpp::traits::named_object<double>}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]' at /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:1131:33, inlined from 'Rcpp::List RLRsimCpp(int, int, int, int, int, int, Rcpp::NumericVector, Rcpp::NumericVector, double, Rcpp::NumericVector, bool)' at RLRsim.cpp:105:23: /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: 'ChiK' may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start<RTYPE>(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ RLRsim.cpp: In function 'Rcpp::List RLRsimCpp(int, int, int, int, int, int, Rcpp::NumericVector, Rcpp::NumericVector, double, Rcpp::NumericVector, bool)': RLRsim.cpp:36:23: note: 'ChiK' was declared here 36 | double LR, N, D, ChiK, ChiSum ; | ^~~~ gcc-14 -I"/data/gannet/ripley/R/R-devel/include" -DNDEBUG -I'/data/gannet/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -Werror=implicit-function-declaration -Wstrict-prototypes -c init.c -o init.o g++-14 -std=gnu++11 -shared -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o RLRsim.so RLRsim.o RcppExports.o init.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RLRsim/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/RLRsim/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/RLRsim/src' installing to /data/gannet/ripley/R/packages/tests-devel/RLRsim.Rcheck/00LOCK-RLRsim/00new/RLRsim/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RLRsim)